Ruminococcus sp. TF12-2

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. TF12-2 is a Gram-positive bacterium characterized by its cocci shape. This microorganism possesses flagella, which may contribute to its motility and ability to navigate its environment. Ruminococcus sp. TF12-2 has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The accession number for Ruminococcus sp. TF12-2 is QTYU00000000.1, which provides a reference for further genomic and taxonomic studies. The specific traits of this bacterium suggest potential roles in various ecological niches, particularly within the gastrointestinal microbiota of ruminants. Gram-positive bacteria, like Ruminococcus sp. TF12-2, often play crucial roles in fermentation processes, contributing to the breakdown of complex carbohydrates. Their ability to thrive in anaerobic environments, such as those found in the rumen of herbivorous animals, underscores their significance in nutrient cycling and energy production within these ecosystems. The presence of flagella may enhance their capacity to colonize specific niches, thereby influencing microbial community dynamics and host health. In summary, Ruminococcus sp. TF12-2 exemplifies the diversity of microbial life that contributes to the complex interactions in the gut microbiome of ruminants, highlighting the importance of such organisms in the digestion and fermentation processes essential for the host's nutrition.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. TF12-2
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. TF12-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. TF12-2 TF12-2.Scaf62, whole genome shotgun

Gene Summary

Adenine Count

894001 bp

Thymine Count

914299 bp

Guanine Count

653767 bp

Cytosine Count

673576 bp

Genome Length

3135953 bp

Protein-coding Genes

2830 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated helicase cas3'DXD23_09155Not AvailableNegative1951823 - 195403383737.0
capa family proteinDXD23_09160Not AvailablePositive1954291 - 195553846101.9
alpha-xylosidaseDXD23_09165Not AvailablePositive1955886 - 195822888757.6
duf3783 domain-containing proteinDXD23_09170Not AvailablePositive1958386 - 195879015379.7
dmt family transporterDXD23_09175Not AvailablePositive1958780 - 195966132552.4
type iv pilus twitching motility protein piltDXD23_09180Not AvailableNegative1959731 - 196080139352.8
type ii/iv secretion system proteinDXD23_09185Not AvailableNegative1960829 - 196250861742.1
prepilin peptidaseDXD23_09190Not AvailablePositive1962668 - 196349230538.4
prepilin-type n-terminal cleavage/methylation domain-containing proteinDXD23_09195Not AvailableNegative1963624 - 196548368575.3
type ii secretion system proteinDXD23_09200Not AvailableNegative1965496 - 196630529407.3

Displaying genes 1941 – 1950 of 3004 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.