Ruminococcus sp. AM57-5

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM57-5 is a Gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, which may contribute to its motility and ecological interactions. Ruminococcus sp. AM57-5 has a single replicon, indicating a streamlined genetic organization. The genome of this strain is cataloged under the accession number QTVT00000000.1. The presence of flagella in Ruminococcus sp. AM57-5 suggests that it may be capable of movement within its environment, potentially allowing it to navigate through complex microbial communities, such as those found in the gastrointestinal tracts of ruminants. Its Gram-positive nature commonly indicates that it may have a thick peptidoglycan layer, which could play a role in its resilience under various environmental conditions. Ruminococcus species are known for their role in the fermentation of complex carbohydrates and the breakdown of plant materials, contributing to the digestive processes in ruminant animals. The specific traits of Ruminococcus sp. AM57-5 may enhance its ability to thrive in such environments, promoting symbiotic relationships within the gut microbiome. Overall, the characteristics of Ruminococcus sp. AM57-5 highlight its potential significance in microbial ecology, particularly in nutrient cycling and energy flow within the digestive systems of herbivorous hosts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM57-5
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM57-5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM57-5 AM57-5.Scaf94, whole genome shotgun

Gene Summary

Adenine Count

967122 bp

Thymine Count

944668 bp

Guanine Count

674359 bp

Cytosine Count

638807 bp

Genome Length

3224956 bp

Protein-coding Genes

2621 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated protein cas4DXA12_14635Not AvailableNegative3058145 - 305881025559.9
type i-c crispr-associated protein cas7/csd2DXA12_14640Not AvailableNegative3058812 - 305966031510.1
hypothetical proteinDXA12_14645Not AvailableNegative3059679 - 306052433094.3
hypothetical proteinDXA12_14650Not AvailableNegative3060560 - 306162741346.3
type i-c crispr-associated protein cas5DXA12_14655Not AvailableNegative3061624 - 306236729081.6
crispr-associated helicase cas3'DXA12_14660Not AvailableNegative3062383 - 306482193554.3
tetr/acrr family transcriptional regulatorDXA12_14665Not AvailableNegative3065293 - 306584121339.4
nad(p)-dependent alcohol dehydrogenaseDXA12_14670Not AvailablePositive3065975 - 306694935162.9
helix-turn-helix domain-containing proteinDXA12_14680Not AvailablePositive3067299 - 30675389354.47
cpbp family intramembrane metalloproteaseDXA12_14685Not AvailableNegative3067792 - 306881738887.8

Displaying genes 2601 – 2610 of 2760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.