Ruminococcus sp. AM57-5

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM57-5 is a Gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, which may contribute to its motility and ecological interactions. Ruminococcus sp. AM57-5 has a single replicon, indicating a streamlined genetic organization. The genome of this strain is cataloged under the accession number QTVT00000000.1. The presence of flagella in Ruminococcus sp. AM57-5 suggests that it may be capable of movement within its environment, potentially allowing it to navigate through complex microbial communities, such as those found in the gastrointestinal tracts of ruminants. Its Gram-positive nature commonly indicates that it may have a thick peptidoglycan layer, which could play a role in its resilience under various environmental conditions. Ruminococcus species are known for their role in the fermentation of complex carbohydrates and the breakdown of plant materials, contributing to the digestive processes in ruminant animals. The specific traits of Ruminococcus sp. AM57-5 may enhance its ability to thrive in such environments, promoting symbiotic relationships within the gut microbiome. Overall, the characteristics of Ruminococcus sp. AM57-5 highlight its potential significance in microbial ecology, particularly in nutrient cycling and energy flow within the digestive systems of herbivorous hosts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM57-5
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM57-5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM57-5 AM57-5.Scaf94, whole genome shotgun

Gene Summary

Adenine Count

967122 bp

Thymine Count

944668 bp

Guanine Count

674359 bp

Cytosine Count

638807 bp

Genome Length

3224956 bp

Protein-coding Genes

2621 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
precorrin-3b c(17)-methyltransferaseDXA12_12945Not AvailablePositive2695242 - 269597026733.6
cobyrinate a,c-diamide synthaseDXA12_12955Not AvailablePositive2697294 - 269876955273.5
endonuclease iiiDXA12_12960Not AvailableNegative2699121 - 269975623481.8
hypothetical proteinDXA12_12965Not AvailableNegative2699757 - 270081541475.7
ribose 5-phosphate isomerase bDXA12_12970Not AvailableNegative2700889 - 270133216018.3
ll-diaminopimelate aminotransferaseDXA12_12975Not AvailableNegative2701591 - 270279344957.9
duf1294 domain-containing proteinDXA12_12980Not AvailableNegative2703017 - 27032779991.93
helicase-exonuclease addab subunit addaDXA12_12985Not AvailableNegative2703274 - 2706993142571.0
helicase-exonuclease addab subunit addbDXA12_12990Not AvailableNegative2706990 - 2710361130899.0
thioredoxinDXA12_12995Not AvailableNegative2710496 - 271080411341.8

Displaying genes 2311 – 2320 of 2760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.