Ruminococcus sp. AM42-10AC

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM42-10AC is a Gram-positive, cocci-shaped bacterium that possesses flagella, indicating it has the ability to move. The presence of a single replicon suggests a streamlined genomic structure, which may contribute to its adaptability and efficiency in specific environments. The accession number for this strain is QUIP00000000.1, which facilitates access to its genetic information for further research and classification. Ecologically, members of the Ruminococcus genus are typically associated with the digestive systems of herbivorous animals, where they play a crucial role in the breakdown of complex carbohydrates. This ability to degrade fibrous plant material is fundamental for nutrient cycling within their ecosystems, highlighting their importance in both digestion and overall microbial community dynamics. The flagellar motility may enhance the organism's ability to navigate through the gut environment, potentially leading to increased efficiency in substrate utilization and interaction with other microbial species. In summary, Ruminococcus sp. AM42-10AC exhibits key traits such as Gram-positive characteristics, cocci shape, and flagellar motility, which together may facilitate its role in fiber degradation and nutrient cycling in its ecological niche.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM42-10AC
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM42-10AC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM42-10AC AM42-10AC.Scaf65, whole genome shotgun

Gene Summary

Adenine Count

1257169 bp

Thymine Count

1230959 bp

Guanine Count

898862 bp

Cytosine Count

861922 bp

Genome Length

4249131 bp

Protein-coding Genes

3753 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobyrinate a,c-diamide synthaseDW903_06400Not AvailablePositive1357893 - 135928751882.7
cobalamin biosynthesis protein cobdDW903_06405Not AvailablePositive1359292 - 136026936063.5
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDW903_06410Not AvailablePositive1360337 - 136138039419.5
cobyric acid synthaseDW903_06415Not AvailablePositive1361413 - 136292155050.9
precorrin-8x methylmutaseDW903_06420Not AvailablePositive1363013 - 136365723198.1
plp-dependent aminotransferase family proteinDW903_06425Not AvailableNegative1363658 - 136498350230.6
pyridoxamine kinaseDW903_06430Not AvailablePositive1365147 - 136601631693.3
tigr04002 family proteinDW903_06435Not AvailablePositive1366083 - 136661918507.1
tigr04100 family radical sam proteinDW903_06440Not AvailablePositive1366664 - 136726923134.5
arsr family transcriptional regulatorDW903_06445Not AvailablePositive1367556 - 136784010509.7

Displaying genes 1321 – 1330 of 3872 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.