Ruminococcus sp. AM29-12LB

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM29-12LB is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, indicating the capability for motility, which may play a role in its ecological interactions. Ruminococcus sp. AM29-12LB has a single replicon, suggesting a streamlined genetic structure that could facilitate efficient reproduction and adaptation within its environment. The accession number for Ruminococcus sp. AM29-12LB is QUJH00000000.1, which serves as a reference for genomic data associated with this organism. Understanding the genomic information can provide insights into its metabolic capacities and potential roles in various biological processes, particularly in the context of fermentation and digestion given its classification within the Ruminococcus genus, commonly associated with the gastrointestinal tracts of herbivores. From an ecological perspective, Ruminococcus species are often implicated in the breakdown of complex carbohydrates, contributing to the fermentation processes in the guts of ruminants. This suggests that Ruminococcus sp. AM29-12LB may play a significant role in the nutrient cycling and energy flow within its habitat, influencing the overall health and functionality of the microbial ecosystem. Its motility, as indicated by the presence of flagella, may enhance its ability to colonize specific niches and interact with other microbial communities, further emphasizing its potential ecological importance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM29-12LB
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM29-12LB
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM29-12LB AM29-12LB.Scaf152, whole genome shotgun

Gene Summary

Adenine Count

1201012 bp

Thymine Count

1191441 bp

Guanine Count

855478 bp

Cytosine Count

833845 bp

Genome Length

4082344 bp

Protein-coding Genes

3585 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-glucose 4,6-dehydrataseDW759_13555Not AvailablePositive2941549 - 294257739209.8
dtdp-4-dehydrorhamnose reductaseDW759_13560Not AvailablePositive2942582 - 294352334761.1
dicarboxylate/amino acid:cation symporterDW759_13565Not AvailableNegative2943629 - 294530861104.5
trap transporter permeaseDW759_13570Not AvailableNegative2945376 - 294732869878.3
c4-dicarboxylate abc transporter substrate-binding proteinDW759_13575Not AvailableNegative2947334 - 294833535595.6
cytidylate kinase-like family proteinDW759_13580Not AvailablePositive2948487 - 294911323639.9
lamb/ycsf family proteinDW759_13585Not AvailableNegative2949220 - 294999027623.3
acetyl-coa carboxylase biotin carboxylase subunitDW759_13590Not AvailableNegative2950014 - 295136349824.9
acetyl-coa carboxylase biotin carboxyl carrier proteinDW759_13595Not AvailableNegative2951382 - 295181615793.9
biotin-dependent carboxyltransferase family proteinDW759_13600Not AvailableNegative2951859 - 295286637099.1

Displaying genes 2601 – 2610 of 3640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.