Ruminococcus sp. AM28-13

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM28-13 is a Gram-positive bacterium characterized by its cocci shape. This bacterium possesses flagella, which suggests it has the capability for motility. Ruminococcus sp. AM28-13 has a single replicon, indicating a streamlined genetic structure. The genome of Ruminococcus sp. AM28-13 is accessible through the accession number QTYO00000000.1, which can facilitate further studies on its genetic makeup and potential functionalities. In the context of its ecological role, Ruminococcus species are known to be important in the degradation of complex carbohydrates, playing a significant role in the digestive processes of herbivores. The presence of flagella may enhance its ability to navigate through varied environments, potentially aiding in its colonization of specific niches within the gut microbiome. This motility could provide a competitive advantage in accessing nutrients, which is crucial for survival and proliferation in their ecological context.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM28-13
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM28-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM28-13 AM28-13.Scaf63, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate synthase subunit betaDW733_00155Not AvailablePositive37910 - 3939454140.8
Trna-thrNot AvailableNot AvailablePositive39604 - 39679Not Available
trna 2-thiocytidine biosynthesis protein ttcaDW733_00165Not AvailableNegative39746 - 4063634656.0
cyth domain-containing proteinDW733_00170Not AvailablePositive40765 - 4132221390.5
amino acid abc transporter substrate-binding proteinDW733_00175Not AvailablePositive41482 - 4233630344.6
type ii toxin-antitoxin system phd/yefm family antitoxinDW733_00180Not AvailablePositive42734 - 429949758.55
type ii toxin-antitoxin system rele/pare family toxinDW733_00185Not AvailablePositive42984 - 4331012413.2
site-specific integraseDW733_00190Not AvailableNegative43349 - 4450044295.6
hypothetical proteinDW733_00195Not AvailableNegative44581 - 447877852.6
hypothetical proteinDW733_00200Not AvailableNegative44933 - 4531613973.4

Displaying genes 71 – 80 of 2726 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.