Ruminococcus sp. AM28-13

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM28-13 is a Gram-positive bacterium characterized by its cocci shape. This bacterium possesses flagella, which suggests it has the capability for motility. Ruminococcus sp. AM28-13 has a single replicon, indicating a streamlined genetic structure. The genome of Ruminococcus sp. AM28-13 is accessible through the accession number QTYO00000000.1, which can facilitate further studies on its genetic makeup and potential functionalities. In the context of its ecological role, Ruminococcus species are known to be important in the degradation of complex carbohydrates, playing a significant role in the digestive processes of herbivores. The presence of flagella may enhance its ability to navigate through varied environments, potentially aiding in its colonization of specific niches within the gut microbiome. This motility could provide a competitive advantage in accessing nutrients, which is crucial for survival and proliferation in their ecological context.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM28-13
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM28-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM28-13 AM28-13.Scaf63, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylacetate--coa ligaseDW733_00120Not AvailablePositive26634 - 2794148581.7
act domain-containing proteinDW733_00125Not AvailablePositive27960 - 2839415738.9
4fe-4s dicluster domain-containing proteinDW733_00130Not AvailablePositive28550 - 287205518.53
transglutaminase domain-containing proteinDW733_00135Not AvailablePositive29263 - 3045942349.2
hypothetical proteinDW733_00140Not AvailablePositive30681 - 3223158225.2
m15 family peptidaseDW733_00145Not AvailablePositive32285 - 3292324885.4
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive32346 - 32445Not Available
glutamate synthase large subunitDW733_00150Not AvailablePositive33282 - 37832167639.0
Ncrna_class:hammerhead_ribozymeNot AvailableNot AvailablePositive35581 - 35652Not Available
Ncrna_class:hammerhead_ribozymeNot AvailableNot AvailablePositive36235 - 36308Not Available

Displaying genes 61 – 70 of 2726 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.