Ruminococcus sp. AM28-13

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM28-13 is a Gram-positive bacterium characterized by its cocci shape. This bacterium possesses flagella, which suggests it has the capability for motility. Ruminococcus sp. AM28-13 has a single replicon, indicating a streamlined genetic structure. The genome of Ruminococcus sp. AM28-13 is accessible through the accession number QTYO00000000.1, which can facilitate further studies on its genetic makeup and potential functionalities. In the context of its ecological role, Ruminococcus species are known to be important in the degradation of complex carbohydrates, playing a significant role in the digestive processes of herbivores. The presence of flagella may enhance its ability to navigate through varied environments, potentially aiding in its colonization of specific niches within the gut microbiome. This motility could provide a competitive advantage in accessing nutrients, which is crucial for survival and proliferation in their ecological context.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM28-13
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM28-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM28-13 AM28-13.Scaf63, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna mismatch repair protein mutsDW733_11990Not AvailableNegative2609577 - 261128665187.6
hypothetical proteinDW733_11995Not AvailableNegative2611297 - 26115489608.63
glutamine amidotransferaseDW733_12000Not AvailableNegative2611674 - 261241427651.2
duf1727 domain-containing proteinDW733_12005Not AvailableNegative2612416 - 261376550390.0
amino acid abc transporter atp-binding proteinDW733_12010Not AvailableNegative2613903 - 261462827049.0
amino acid abc transporter permeaseDW733_12015Not AvailableNegative2614615 - 261530725497.9
amino acid abc transporter substrate-binding proteinDW733_12020Not AvailableNegative2615376 - 261615527725.9
peptidylprolyl isomeraseDW733_12025Not AvailableNegative2616369 - 261700422727.7
hypothetical proteinDW733_12030Not AvailablePositive2617182 - 2619911102435.0
beta-mannosidaseDW733_12035Not AvailableNegative2620034 - 262168660865.2

Displaying genes 2371 – 2380 of 2726 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.