Ruminococcus sp. AM28-13

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM28-13 is a Gram-positive bacterium characterized by its cocci shape. This bacterium possesses flagella, which suggests it has the capability for motility. Ruminococcus sp. AM28-13 has a single replicon, indicating a streamlined genetic structure. The genome of Ruminococcus sp. AM28-13 is accessible through the accession number QTYO00000000.1, which can facilitate further studies on its genetic makeup and potential functionalities. In the context of its ecological role, Ruminococcus species are known to be important in the degradation of complex carbohydrates, playing a significant role in the digestive processes of herbivores. The presence of flagella may enhance its ability to navigate through varied environments, potentially aiding in its colonization of specific niches within the gut microbiome. This motility could provide a competitive advantage in accessing nutrients, which is crucial for survival and proliferation in their ecological context.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM28-13
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM28-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM28-13 AM28-13.Scaf63, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosyl-atp diphosphataseDW733_00785Not AvailablePositive172005 - 17234312828.1
hypothetical proteinDW733_00790Not AvailablePositive172496 - 17326027307.3
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabDW733_00795Not AvailablePositive173404 - 17480453811.6
ylbf family regulatorDW733_00800Not AvailablePositive174841 - 17525115182.1
dna mismatch repair protein mutsDW733_00805Not AvailablePositive175390 - 17800597725.9
tigr04076 family proteinDW733_00810Not AvailablePositive178015 - 17836813477.1
dna mismatch repair endonuclease mutlDW733_00815Not AvailablePositive178383 - 18046177687.9
trna (adenosine(37)-n6)-dimethylallyltransferase miaaDW733_00820Not AvailablePositive180482 - 18142635641.6
rna chaperone hfqDW733_00825Not AvailablePositive181500 - 1817428963.91
hypothetical proteinDW733_00830Not AvailablePositive181757 - 18299245830.7

Displaying genes 201 – 210 of 2726 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.