Ruminococcus sp. AM16-34

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM16-34 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This species has a single replicon, suggesting a streamlined genetic organization. The strain is cataloged under the accession number QTUR00000000.1, which allows for reference and further research within microbial databases. The presence of flagella in Ruminococcus sp. AM16-34 indicates potential motility, which may play a role in its ecological interactions within its environment. Gram-positive bacteria typically possess a thick peptidoglycan layer in their cell walls, which can provide structural support and protection against environmental stressors. This characteristic, combined with its motile capabilities, could facilitate the organism's adaptation to various ecological niches. Ruminococcus species are often associated with the rumen of herbivores, where they contribute to the breakdown of complex carbohydrates. This ability to degrade polysaccharides suggests a significant role in the digestive processes of ruminants, aiding in nutrient absorption and energy production. Understanding the traits of Ruminococcus sp. AM16-34 could provide insights into its functional role in microbial communities, especially in relation to fiber digestion and its contributions to the overall health of its host organisms.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM16-34
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM16-34
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM16-34 AM16-34.Scaf40, whole genome shotgun

Gene Summary

Adenine Count

909189 bp

Thymine Count

878850 bp

Guanine Count

629662 bp

Cytosine Count

599552 bp

Genome Length

3017343 bp

Protein-coding Genes

2660 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
na/pi cotransporter family proteinDW187_08640Not AvailablePositive1851873 - 185359162024.0
cca trna nucleotidyltransferaseDW187_08645Not AvailablePositive1853912 - 185525251561.5
marr family transcriptional regulatorDW187_08650Not AvailablePositive1855399 - 185648443882.7
hu family dna-binding proteinDW187_08655Not AvailablePositive1856654 - 18569269672.7
rna-binding s4 domain-containing proteinDW187_08660Not AvailablePositive1856952 - 18571918923.0
sporulation protein yabpDW187_08665Not AvailablePositive1857469 - 185775610744.9
hypothetical proteinDW187_08670Not AvailablePositive1857769 - 185809812799.2
septum formation initiator family proteinDW187_08675Not AvailablePositive1858199 - 185853112760.6
serine/threonine protein phosphataseDW187_08680Not AvailablePositive1858743 - 186014652761.0
trna lysidine(34) synthetase tilsDW187_08685Not AvailablePositive1860186 - 186163456107.6

Displaying genes 1671 – 1680 of 2723 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.