Ruminococcus sp. AM16-34

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM16-34 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This species has a single replicon, suggesting a streamlined genetic organization. The strain is cataloged under the accession number QTUR00000000.1, which allows for reference and further research within microbial databases. The presence of flagella in Ruminococcus sp. AM16-34 indicates potential motility, which may play a role in its ecological interactions within its environment. Gram-positive bacteria typically possess a thick peptidoglycan layer in their cell walls, which can provide structural support and protection against environmental stressors. This characteristic, combined with its motile capabilities, could facilitate the organism's adaptation to various ecological niches. Ruminococcus species are often associated with the rumen of herbivores, where they contribute to the breakdown of complex carbohydrates. This ability to degrade polysaccharides suggests a significant role in the digestive processes of ruminants, aiding in nutrient absorption and energy production. Understanding the traits of Ruminococcus sp. AM16-34 could provide insights into its functional role in microbial communities, especially in relation to fiber digestion and its contributions to the overall health of its host organisms.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM16-34
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM16-34
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM16-34 AM16-34.Scaf40, whole genome shotgun

Gene Summary

Adenine Count

909189 bp

Thymine Count

878850 bp

Guanine Count

629662 bp

Cytosine Count

599552 bp

Genome Length

3017343 bp

Protein-coding Genes

2660 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal abc transporter permeaseDW187_06775Not AvailableNegative1481706 - 148253028804.8
metal abc transporter atp-binding proteinDW187_06780Not AvailableNegative1482523 - 148323326181.7
zinc abc transporter substrate-binding proteinDW187_06785Not AvailableNegative1483233 - 148430940793.2
dihydrofolate reductaseDW187_06790Not AvailableNegative1484362 - 148485018937.7
thymidylate synthaseDW187_06795Not AvailableNegative1484863 - 148571132913.2
homoserine dehydrogenaseDW187_06800Not AvailableNegative1485958 - 148723546328.1
Trna-glyNot AvailableNot AvailablePositive1487484 - 1487556Not Available
Trna-glyNot AvailableNot AvailablePositive1487604 - 1487676Not Available
type ii toxin-antitoxin system hicb family antitoxinDW187_06815Not AvailablePositive1487807 - 148808510613.1
atp-binding cassette domain-containing proteinDW187_06820Not AvailableNegative1488156 - 148892928576.1

Displaying genes 1321 – 1330 of 2723 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.