Ruminococcus sp. AM16-34

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM16-34 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This species has a single replicon, suggesting a streamlined genetic organization. The strain is cataloged under the accession number QTUR00000000.1, which allows for reference and further research within microbial databases. The presence of flagella in Ruminococcus sp. AM16-34 indicates potential motility, which may play a role in its ecological interactions within its environment. Gram-positive bacteria typically possess a thick peptidoglycan layer in their cell walls, which can provide structural support and protection against environmental stressors. This characteristic, combined with its motile capabilities, could facilitate the organism's adaptation to various ecological niches. Ruminococcus species are often associated with the rumen of herbivores, where they contribute to the breakdown of complex carbohydrates. This ability to degrade polysaccharides suggests a significant role in the digestive processes of ruminants, aiding in nutrient absorption and energy production. Understanding the traits of Ruminococcus sp. AM16-34 could provide insights into its functional role in microbial communities, especially in relation to fiber digestion and its contributions to the overall health of its host organisms.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM16-34
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM16-34
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM16-34


Gene Summary

Adenine Count

909189 bp

Thymine Count

878850 bp

Guanine Count

629662 bp

Cytosine Count

599552 bp

Genome Length

3017343 bp

Protein-coding Genes

2660 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-c crispr-associated endonuclease cas1DW187_05870Not AvailableNegative1267901 - 126893239225.6
crispr-associated protein cas4DW187_05875Not AvailableNegative1268929 - 126959425703.1
type i-c crispr-associated protein cas7/csd2DW187_05880Not AvailableNegative1269596 - 127044431423.1
type i-c crispr-associated protein cas8c/csd1DW187_05885Not AvailableNegative1270463 - 127241276057.5
type i-c crispr-associated protein cas5DW187_05890Not AvailableNegative1272409 - 127315229160.7
crispr-associated helicase cas3'DW187_05895Not AvailableNegative1273167 - 127560593496.3
carbamoyl-phosphate synthase large subunitDW187_05900Not AvailableNegative1276184 - 1279387117194.0
carbamoyl phosphate synthase small subunitDW187_05905Not AvailableNegative1279387 - 128045738910.6
hypothetical proteinDW187_05910Not AvailableNegative1280663 - 128189848184.9
peptidoglycan-binding proteinDW187_05915Not AvailableNegative1281936 - 128322848781.2

Displaying genes 1141 – 1150 of 2723 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.