Ruminococcus sp. AF37-3AC

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF37-3AC is a gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, enabling motility, which is a notable trait among many cocci. Genomic analysis indicates that Ruminococcus sp. AF37-3AC has a single replicon, suggesting a streamlined genomic organization. The accession number for this strain is QTVD00000000.1, which allows for reference and retrieval of its genomic data for further study. Ruminococcus species are generally known for their role in the fermentation of complex carbohydrates in the gastrointestinal tracts of various animals, particularly ruminants. The presence of flagella in Ruminococcus sp. AF37-3AC may indicate an adaptation to its ecological niche, allowing it to navigate through the viscous environments of the gut, where it likely contributes to the breakdown of plant polysaccharides. This motility could enhance its ability to colonize and establish itself in the gut microbiota, facilitating its role in digestion and nutrient absorption. Overall, Ruminococcus sp. AF37-3AC serves as a representative example of bacteria that play a critical role in the digestive processes of ruminant hosts, showcasing the importance of motility and structural traits in microbial ecology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF37-3AC
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF37-3AC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF37-3AC AF37-3AC.Scaf43, whole genome shotgun

Gene Summary

Adenine Count

680849 bp

Thymine Count

689679 bp

Guanine Count

466900 bp

Cytosine Count

468872 bp

Genome Length

2306537 bp

Protein-coding Genes

2058 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr04100 family radical sam proteinDW017_00160Not AvailablePositive25198 - 2580022911.0
hypothetical proteinDW017_00165Not AvailableNegative25962 - 2735354106.8
type iii-a crispr-associated ramp protein csm5DW017_00170Not AvailableNegative27350 - 2845942339.8
type iii-a crispr-associated ramp protein csm4DW017_00175Not AvailableNegative28429 - 2934634144.7
type iii-a crispr-associated ramp protein csm3DW017_00180Not AvailableNegative29343 - 3000824413.5
type iii-a crispr-associated protein csm2DW017_00185Not AvailableNegative30021 - 3054820580.5
Ncrna_class:hammerhead_ribozymeNot AvailableNot AvailablePositive32911 - 32975Not Available
type iii-a crispr-associated protein cas10/csm1DW017_00190Not AvailableNegative30517 - 3295291828.5
crispr system precrrna processing endoribonuclease ramp protein cas6DW017_00195Not AvailableNegative32949 - 3369827861.4
two pore domain potassium channel family proteinDW017_00200Not AvailablePositive34824 - 3524615795.8

Displaying genes 151 – 160 of 2184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.