Ruminococcus sp. AF34-12

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF34-12 is a Gram-positive bacterium characterized by its cocci shape. It possesses flagella, which may contribute to its motility. This organism has a single replicon, indicating a streamlined genomic structure. The specific accession number for this strain is QTVK00000000.1. Ruminococcus species are generally known for their role in the fermentation of complex carbohydrates in the gastrointestinal tract, particularly in ruminants. They are involved in the breakdown of plant polysaccharides, contributing to the overall digestive process. The presence of flagella in Ruminococcus sp. AF34-12 suggests that it may have enhanced mobility, potentially allowing it to navigate its environment more effectively, which could be advantageous in the complex microbial ecosystems of the gut. The ecological role of Ruminococcus sp. AF34-12 is likely significant in the context of nutrient cycling and energy production within the rumen, where it may assist in the degradation of fibrous plant materials. Understanding the traits of this bacterium can provide insights into its contributions to the microbiome of ruminants, highlighting its importance in both animal health and agricultural systems. Further research could elucidate its specific metabolic pathways and interactions within microbial communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF34-12
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF34-12
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF34-12 AF34-12.Scaf70, whole genome shotgun

Gene Summary

Adenine Count

841837 bp

Thymine Count

844688 bp

Guanine Count

621328 bp

Cytosine Count

630283 bp

Genome Length

2938240 bp

Protein-coding Genes

2593 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtpase eraDWZ62_09975Not AvailablePositive2184935 - 218584933949.2
dna repair protein recoDWZ62_09980Not AvailablePositive2186004 - 218675629118.3
endonuclease muts2DWZ62_09985Not AvailablePositive2186801 - 218919789805.0
sporulation protein yunbDWZ62_09990Not AvailablePositive2189199 - 218988225012.4
nad-dependent dna ligase ligaDWZ62_09995Not AvailablePositive2190166 - 219214273488.2
inorganic pyrophosphataseDWZ62_10000Not AvailablePositive2192145 - 219247712586.8
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit cDWZ62_10005Not AvailablePositive2192511 - 219278010235.5
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataDWZ62_10010Not AvailablePositive2192793 - 219424452375.5
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbDWZ62_10015Not AvailablePositive2194262 - 219569853137.0
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabDWZ62_10020Not AvailableNegative2195757 - 219706148951.6

Displaying genes 1961 – 1970 of 2640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.