Ruminococcus sp. AF25-28AC

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF25-28AC is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella, which may facilitate motility. This species has been identified with a single replicon, indicating a streamlined genetic structure. The genome of Ruminococcus sp. AF25-28AC is cataloged under the accession QUFJ00000000.1. The genus Ruminococcus is known for its role in the human gut microbiome, particularly in the fermentation of dietary fibers. This capability is significant for the breakdown of complex carbohydrates, contributing to the overall health of the host by producing short-chain fatty acids (SCFAs) that can serve as an energy source and maintain gut health. The presence of flagella suggests that Ruminococcus sp. AF25-28AC may have enhanced mobility compared to non-flagellated species. This could allow it to navigate the complex environment of the gut more effectively, potentially aiding in its colonization and interaction with other gut microbiota. In summary, Ruminococcus sp. AF25-28AC demonstrates important traits such as its Gram-positive nature, cocci shape, flagellar motility, and a singular replicon. These characteristics may play a role in its ecological niche within the gut microbiome, emphasizing its potential importance in fiber degradation and gut health maintenance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF25-28AC
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF25-28AC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF25-28AC AF25-28AC.Scaf98, whole genome shotgun

Gene Summary

Adenine Count

1277168 bp

Thymine Count

1281696 bp

Guanine Count

889331 bp

Cytosine Count

887796 bp

Genome Length

4336844 bp

Protein-coding Genes

3794 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna-binding s4 domain-containing proteinDWY50_15820Not AvailableNegative3373257 - 33734667884.58
dna polymerase iii subunit betaDWY50_15825Not AvailableNegative3373480 - 337459542427.7
chromosomal replication initiator protein dnaaDWY50_15830Not AvailableNegative3374874 - 337622951446.6
50s ribosomal protein l34DWY50_15835Not AvailablePositive3376853 - 33769875065.49
ribonuclease p protein componentDWY50_15840Not AvailablePositive3377051 - 337742214269.1
membrane protein insertion efficiency factor yiddDWY50_15845Not AvailablePositive3377394 - 33776037936.99
membrane protein insertase yidcDWY50_15850Not AvailablePositive3377691 - 337898047360.2
kh domain-containing proteinDWY50_15855Not AvailablePositive3379001 - 337994235817.1
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeDWY50_15860Not AvailablePositive3380217 - 338159050921.3
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgDWY50_15865Not AvailablePositive3381661 - 338353569685.2

Displaying genes 3011 – 3020 of 3918 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.