Ruminococcus sp. AF25-28AC

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF25-28AC is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella, which may facilitate motility. This species has been identified with a single replicon, indicating a streamlined genetic structure. The genome of Ruminococcus sp. AF25-28AC is cataloged under the accession QUFJ00000000.1. The genus Ruminococcus is known for its role in the human gut microbiome, particularly in the fermentation of dietary fibers. This capability is significant for the breakdown of complex carbohydrates, contributing to the overall health of the host by producing short-chain fatty acids (SCFAs) that can serve as an energy source and maintain gut health. The presence of flagella suggests that Ruminococcus sp. AF25-28AC may have enhanced mobility compared to non-flagellated species. This could allow it to navigate the complex environment of the gut more effectively, potentially aiding in its colonization and interaction with other gut microbiota. In summary, Ruminococcus sp. AF25-28AC demonstrates important traits such as its Gram-positive nature, cocci shape, flagellar motility, and a singular replicon. These characteristics may play a role in its ecological niche within the gut microbiome, emphasizing its potential importance in fiber degradation and gut health maintenance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF25-28AC
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF25-28AC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF25-28AC AF25-28AC.Scaf98, whole genome shotgun

Gene Summary

Adenine Count

1277168 bp

Thymine Count

1281696 bp

Guanine Count

889331 bp

Cytosine Count

887796 bp

Genome Length

4336844 bp

Protein-coding Genes

3794 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
elongation factor pDWY50_14625Not AvailableNegative3126934 - 312749120569.5
shikimate kinaseDWY50_14630Not AvailableNegative3127635 - 312815919805.3
yqeg family had iiia-type phosphataseDWY50_14635Not AvailableNegative3128156 - 312865919290.0
citrate/2-methylcitrate synthaseDWY50_14640Not AvailableNegative3128754 - 313011551249.9
nadp-specific glutamate dehydrogenaseDWY50_14645Not AvailablePositive3130705 - 313203948639.4
transcriptional repressor nrdrDWY50_14650Not AvailableNegative3132335 - 313278417550.0
ylmc/ymxh family sporulation proteinDWY50_14655Not AvailablePositive3133065 - 31333199497.67
rna polymerase sporulation sigma factor siggDWY50_14660Not AvailablePositive3133539 - 313431829945.3
glycosyltransferaseDWY50_14665Not AvailableNegative3134458 - 3137346113191.0
hypothetical proteinDWY50_14670Not AvailableNegative3137554 - 313884351153.5

Displaying genes 2791 – 2800 of 3918 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.