Ruminococcus sp. AF25-28AC

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF25-28AC is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella, which may facilitate motility. This species has been identified with a single replicon, indicating a streamlined genetic structure. The genome of Ruminococcus sp. AF25-28AC is cataloged under the accession QUFJ00000000.1. The genus Ruminococcus is known for its role in the human gut microbiome, particularly in the fermentation of dietary fibers. This capability is significant for the breakdown of complex carbohydrates, contributing to the overall health of the host by producing short-chain fatty acids (SCFAs) that can serve as an energy source and maintain gut health. The presence of flagella suggests that Ruminococcus sp. AF25-28AC may have enhanced mobility compared to non-flagellated species. This could allow it to navigate the complex environment of the gut more effectively, potentially aiding in its colonization and interaction with other gut microbiota. In summary, Ruminococcus sp. AF25-28AC demonstrates important traits such as its Gram-positive nature, cocci shape, flagellar motility, and a singular replicon. These characteristics may play a role in its ecological niche within the gut microbiome, emphasizing its potential importance in fiber degradation and gut health maintenance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF25-28AC
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF25-28AC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF25-28AC AF25-28AC.Scaf98, whole genome shotgun

Gene Summary

Adenine Count

1277168 bp

Thymine Count

1281696 bp

Guanine Count

889331 bp

Cytosine Count

887796 bp

Genome Length

4336844 bp

Protein-coding Genes

3794 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna guanosine(34) transglycosylase tgtDWY50_14575Not AvailableNegative3112811 - 311396243394.3
2-hydroxyglutaryl-coa dehydrataseDWY50_14580Not AvailablePositive3114258 - 3118499156917.0
polysaccharide biosynthesis proteinDWY50_14585Not AvailableNegative3118799 - 312042758887.4
uracil-dna glycosylaseDWY50_14590Not AvailableNegative3120473 - 312114725539.5
imidazole glycerol phosphate synthase subunit hisfDWY50_14595Not AvailableNegative3121180 - 312193827026.2
imidazole glycerol phosphate synthase subunit hishDWY50_14600Not AvailableNegative3121940 - 312257823442.2
hamp domain-containing proteinDWY50_14605Not AvailableNegative3122798 - 312434259211.7
dna-binding response regulatorDWY50_14610Not AvailableNegative3124339 - 312501925928.4
Tmrna,resume consensus sequence (at 86): tataaacgcagacgaacaNot AvailableNot AvailablePositive3125426 - 3125771Not Available
aldo/keto reductaseDWY50_14620Not AvailableNegative3125810 - 312681737159.6

Displaying genes 2781 – 2790 of 3918 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.