Ruminococcus sp. AF25-28AC

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF25-28AC is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella, which may facilitate motility. This species has been identified with a single replicon, indicating a streamlined genetic structure. The genome of Ruminococcus sp. AF25-28AC is cataloged under the accession QUFJ00000000.1. The genus Ruminococcus is known for its role in the human gut microbiome, particularly in the fermentation of dietary fibers. This capability is significant for the breakdown of complex carbohydrates, contributing to the overall health of the host by producing short-chain fatty acids (SCFAs) that can serve as an energy source and maintain gut health. The presence of flagella suggests that Ruminococcus sp. AF25-28AC may have enhanced mobility compared to non-flagellated species. This could allow it to navigate the complex environment of the gut more effectively, potentially aiding in its colonization and interaction with other gut microbiota. In summary, Ruminococcus sp. AF25-28AC demonstrates important traits such as its Gram-positive nature, cocci shape, flagellar motility, and a singular replicon. These characteristics may play a role in its ecological niche within the gut microbiome, emphasizing its potential importance in fiber degradation and gut health maintenance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF25-28AC
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF25-28AC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF25-28AC AF25-28AC.Scaf98, whole genome shotgun

Gene Summary

Adenine Count

1277168 bp

Thymine Count

1281696 bp

Guanine Count

889331 bp

Cytosine Count

887796 bp

Genome Length

4336844 bp

Protein-coding Genes

3794 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiDWY50_11230Not AvailablePositive2398919 - 240011845231.5
6,7-dimethyl-8-ribityllumazine synthaseDWY50_11235Not AvailablePositive2400233 - 240070016559.1
rlua family pseudouridine synthaseDWY50_11240Not AvailableNegative2400697 - 240174638833.3
2-dehydropantoate 2-reductaseDWY50_11245Not AvailablePositive2401899 - 240283434647.3
phosphoenolpyruvate carboxykinase (atp)DWY50_11250Not AvailableNegative2402972 - 240457659177.1
hypothetical proteinDWY50_11255Not AvailablePositive2405037 - 240580129226.0
arsc family transcriptional regulatorDWY50_11260Not AvailablePositive2406042 - 240638313056.8
atp-binding proteinDWY50_11265Not AvailablePositive2406562 - 240757838318.3
hypothetical proteinDWY50_11270Not AvailablePositive2407575 - 240809619919.0
duf1653 domain-containing proteinDWY50_11275Not AvailablePositive2408158 - 240863418317.5

Displaying genes 2151 – 2160 of 3918 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.