Ruminococcus sp. AF25-28AC

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF25-28AC is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella, which may facilitate motility. This species has been identified with a single replicon, indicating a streamlined genetic structure. The genome of Ruminococcus sp. AF25-28AC is cataloged under the accession QUFJ00000000.1. The genus Ruminococcus is known for its role in the human gut microbiome, particularly in the fermentation of dietary fibers. This capability is significant for the breakdown of complex carbohydrates, contributing to the overall health of the host by producing short-chain fatty acids (SCFAs) that can serve as an energy source and maintain gut health. The presence of flagella suggests that Ruminococcus sp. AF25-28AC may have enhanced mobility compared to non-flagellated species. This could allow it to navigate the complex environment of the gut more effectively, potentially aiding in its colonization and interaction with other gut microbiota. In summary, Ruminococcus sp. AF25-28AC demonstrates important traits such as its Gram-positive nature, cocci shape, flagellar motility, and a singular replicon. These characteristics may play a role in its ecological niche within the gut microbiome, emphasizing its potential importance in fiber degradation and gut health maintenance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF25-28AC
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF25-28AC
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF25-28AC AF25-28AC.Scaf98, whole genome shotgun

Gene Summary

Adenine Count

1277168 bp

Thymine Count

1281696 bp

Guanine Count

889331 bp

Cytosine Count

887796 bp

Genome Length

4336844 bp

Protein-coding Genes

3794 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorDWY50_06285Not AvailableNegative1332176 - 133309934483.7
alpha-n-arabinofuranosidaseDWY50_06290Not AvailablePositive1333287 - 133424336755.9
arabinan endo-1,5-alpha-l-arabinosidaseDWY50_06295Not AvailablePositive1334288 - 133586258697.7
arsr family transcriptional regulatorDWY50_06300Not AvailableNegative1335916 - 133683934022.8
extracellular solute-binding proteinDWY50_06305Not AvailablePositive1337235 - 133862951935.2
sugar abc transporter permeaseDWY50_06310Not AvailablePositive1338914 - 133979532978.5
carbohydrate abc transporter permeaseDWY50_06315Not AvailablePositive1339827 - 134067231522.7
alpha-n-arabinofuranosidaseDWY50_06320Not AvailablePositive1340703 - 134222657587.1
murr/rpir family transcriptional regulatorDWY50_06325Not AvailableNegative1342338 - 134316531518.8
glucosamine-6-phosphate deaminaseDWY50_06330Not AvailablePositive1343440 - 134418327085.3

Displaying genes 1201 – 1210 of 3918 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.