Ruminococcus sp. AF19-15

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF19-15 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism has a single replicon, which indicates a streamlined genomic structure that may reflect its specific ecological niche and metabolic capabilities. The accession number for Ruminococcus sp. AF19-15 is QTWR00000000.1, which provides a reference for researchers seeking genetic and genomic information about this strain. As a member of the genus Ruminococcus, this species is likely to be involved in the fermentation processes within the digestive systems of ruminant animals. Ruminococcus species are known for their role in breaking down complex carbohydrates, particularly cellulose, which is a crucial function in the digestion of plant materials. The presence of flagella suggests that Ruminococcus sp. AF19-15 may exhibit motility, which could be advantageous for colonization in the gut environment. From an ecological perspective, the ability of Ruminococcus sp. AF19-15 to contribute to the breakdown of lignocellulosic biomass positions it as a significant player in nutrient cycling within its habitat. This function not only supports the health and nutrient absorption of ruminant hosts but also impacts the overall microbial community structure and dynamics within the gastrointestinal tract. Understanding the traits of Ruminococcus sp. AF19-15 can provide insights into its ecological role and potential applications in improving livestock digestion and health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF19-15
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF19-15
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF19-15 AF19-15.Scaf72, whole genome shotgun

Gene Summary

Adenine Count

840997 bp

Thymine Count

852937 bp

Guanine Count

630445 bp

Cytosine Count

628264 bp

Genome Length

2953218 bp

Protein-coding Genes

2610 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytr family transcriptional regulatorDWX34_03705Not AvailablePositive794296 - 79567852300.8
csor family transcriptional regulatorDWX34_03710Not AvailablePositive795835 - 79616412477.2
heavy metal translocating p-type atpaseDWX34_03715Not AvailablePositive796179 - 79870189381.8
type i-e crispr-associated protein cas6/cse3/caseDWX34_03720Not AvailableNegative799081 - 79970423759.7
type i-e crispr-associated protein cas5/casdDWX34_03725Not AvailableNegative799713 - 80036924313.4
type i-e crispr-associated protein cas7/cse4/cascDWX34_03730Not AvailableNegative800375 - 80146040131.5
type i-e crispr-associated protein cse2/casbDWX34_03735Not AvailableNegative801457 - 80204422654.1
type i-e crispr-associated protein cse1/casaDWX34_03740Not AvailableNegative802054 - 80363461244.5
crispr-associated helicase cas3'DWX34_03745Not AvailableNegative803631 - 80583583374.6
crispr-associated endonuclease cas3''DWX34_03750Not AvailableNegative805998 - 80628210612.9

Displaying genes 781 – 790 of 2690 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.