Ruminococcus sp. AF19-15

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF19-15 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism has a single replicon, which indicates a streamlined genomic structure that may reflect its specific ecological niche and metabolic capabilities. The accession number for Ruminococcus sp. AF19-15 is QTWR00000000.1, which provides a reference for researchers seeking genetic and genomic information about this strain. As a member of the genus Ruminococcus, this species is likely to be involved in the fermentation processes within the digestive systems of ruminant animals. Ruminococcus species are known for their role in breaking down complex carbohydrates, particularly cellulose, which is a crucial function in the digestion of plant materials. The presence of flagella suggests that Ruminococcus sp. AF19-15 may exhibit motility, which could be advantageous for colonization in the gut environment. From an ecological perspective, the ability of Ruminococcus sp. AF19-15 to contribute to the breakdown of lignocellulosic biomass positions it as a significant player in nutrient cycling within its habitat. This function not only supports the health and nutrient absorption of ruminant hosts but also impacts the overall microbial community structure and dynamics within the gastrointestinal tract. Understanding the traits of Ruminococcus sp. AF19-15 can provide insights into its ecological role and potential applications in improving livestock digestion and health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF19-15
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF19-15
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF19-15 AF19-15.Scaf72, whole genome shotgun

Gene Summary

Adenine Count

840997 bp

Thymine Count

852937 bp

Guanine Count

630445 bp

Cytosine Count

628264 bp

Genome Length

2953218 bp

Protein-coding Genes

2610 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
restriction endonucleaseDWX34_06600Not AvailableNegative1436686 - 143768737642.7
protease lon-related brex system protein brxlDWX34_06605Not AvailableNegative1437702 - 143976877173.8
brex-1 system phosphatase pglz type aDWX34_06610Not AvailableNegative1439792 - 144238999100.3
hypothetical proteinDWX34_06615Not AvailableNegative1442411 - 144298921076.0
brex-1 system adenine-specific dna-methyltransferase pglxDWX34_06620Not AvailableNegative1442999 - 1446448132264.0
brex system p-loop protein brxcDWX34_06625Not AvailableNegative1446459 - 1450013134981.0
duf1788 domain-containing proteinDWX34_06630Not AvailableNegative1450026 - 145058321597.2
duf1819 family proteinDWX34_06635Not AvailableNegative1450598 - 145122723985.8
xre family transcriptional regulatorDWX34_06640Not AvailableNegative1451272 - 14514757511.31
duf2326 domain-containing proteinDWX34_06645Not AvailableNegative1451492 - 145182112487.9

Displaying genes 1351 – 1360 of 2690 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.