Ruminococcus sp. AF19-15

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF19-15 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism has a single replicon, which indicates a streamlined genomic structure that may reflect its specific ecological niche and metabolic capabilities. The accession number for Ruminococcus sp. AF19-15 is QTWR00000000.1, which provides a reference for researchers seeking genetic and genomic information about this strain. As a member of the genus Ruminococcus, this species is likely to be involved in the fermentation processes within the digestive systems of ruminant animals. Ruminococcus species are known for their role in breaking down complex carbohydrates, particularly cellulose, which is a crucial function in the digestion of plant materials. The presence of flagella suggests that Ruminococcus sp. AF19-15 may exhibit motility, which could be advantageous for colonization in the gut environment. From an ecological perspective, the ability of Ruminococcus sp. AF19-15 to contribute to the breakdown of lignocellulosic biomass positions it as a significant player in nutrient cycling within its habitat. This function not only supports the health and nutrient absorption of ruminant hosts but also impacts the overall microbial community structure and dynamics within the gastrointestinal tract. Understanding the traits of Ruminococcus sp. AF19-15 can provide insights into its ecological role and potential applications in improving livestock digestion and health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF19-15
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF19-15
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF19-15 AF19-15.Scaf72, whole genome shotgun

Gene Summary

Adenine Count

840997 bp

Thymine Count

852937 bp

Guanine Count

630445 bp

Cytosine Count

628264 bp

Genome Length

2953218 bp

Protein-coding Genes

2610 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i dna topoisomeraseDWX34_06345Not AvailablePositive1382986 - 138507678514.9
methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfoDWX34_06350Not AvailablePositive1385066 - 138638248528.4
phosphate acyltransferase plsxDWX34_06355Not AvailablePositive1386393 - 138740336140.1
ribonuclease iiiDWX34_06360Not AvailablePositive1387403 - 138810126248.3
radical sam proteinDWX34_06365Not AvailablePositive1388088 - 138911338004.0
chromosome segregation protein smcDWX34_06370Not AvailablePositive1389113 - 1392679133650.0
signal recognition particle-docking protein ftsyDWX34_06375Not AvailablePositive1392690 - 139359533033.1
cysteine hydrolaseDWX34_06380Not AvailablePositive1393646 - 139414618428.4
rdgb/ham1 family non-canonical purine ntp pyrophosphataseDWX34_06385Not AvailablePositive1394157 - 139473520925.8
yhby family rna-binding proteinDWX34_06390Not AvailablePositive1394754 - 139505010883.4

Displaying genes 1301 – 1310 of 2690 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.