Ruminococcus sp. AF18-29

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF18-29 is a Gram-positive bacterium characterized by its cocci shape. It possesses flagella, which may contribute to its motility in various environments. The organism has a single replicon, indicating a streamlined genomic structure. Its genetic information is cataloged under the accession number QTWT00000000.1. Ruminococcus species are often associated with the gastrointestinal tract of herbivores, playing a crucial role in the fermentation of complex carbohydrates, particularly in the breakdown of plant materials. The presence of flagella in Ruminococcus sp. AF18-29 suggests potential adaptability and mobility within its habitat, which could enhance its ability to colonize and thrive in the gut microbiome. Understanding the ecological role of Ruminococcus sp. AF18-29 can provide insights into its contributions to digestive processes and microbial community dynamics within the gastrointestinal ecosystem. Its Gram-positive nature and cocci morphology may influence its interactions with other microbial species and the host, potentially impacting nutrient absorption and overall gut health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF18-29
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF18-29
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF18-29 AF18-29.Scaf89, whole genome shotgun

Gene Summary

Adenine Count

893996 bp

Thymine Count

892223 bp

Guanine Count

661031 bp

Cytosine Count

656185 bp

Genome Length

3103685 bp

Protein-coding Genes

2862 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vanz family proteinDWX11_03345Not AvailableNegative718125 - 71861019019.6
glutamine--fructose-6-phosphate transaminase (isomerizing)DWX11_03350Not AvailableNegative718561 - 72039967351.8
nudix domain-containing proteinDWX11_03355Not AvailableNegative720413 - 72087117068.3
nad-dependent epimerase/dehydratase family proteinDWX11_03360Not AvailableNegative720871 - 72206444962.5
udp-n-acetyl glucosamine 2-epimeraseDWX11_03365Not AvailableNegative722078 - 72326844853.9
hypothetical proteinDWX11_03370Not AvailableNegative723308 - 72381718312.2
nad-dependent epimerase/dehydratase family proteinDWX11_03375Not AvailableNegative723819 - 72485338365.1
hypothetical proteinDWX11_03380Not AvailableNegative725009 - 72652357091.1
4fe-4s dicluster domain-containing proteinDWX11_03385Not AvailableNegative726544 - 72767742929.9
polysaccharide pyruvyl transferase family proteinDWX11_03390Not AvailableNegative727655 - 72876142833.1

Displaying genes 781 – 790 of 3013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.