Ruminococcus sp. AF18-29

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF18-29 is a Gram-positive bacterium characterized by its cocci shape. It possesses flagella, which may contribute to its motility in various environments. The organism has a single replicon, indicating a streamlined genomic structure. Its genetic information is cataloged under the accession number QTWT00000000.1. Ruminococcus species are often associated with the gastrointestinal tract of herbivores, playing a crucial role in the fermentation of complex carbohydrates, particularly in the breakdown of plant materials. The presence of flagella in Ruminococcus sp. AF18-29 suggests potential adaptability and mobility within its habitat, which could enhance its ability to colonize and thrive in the gut microbiome. Understanding the ecological role of Ruminococcus sp. AF18-29 can provide insights into its contributions to digestive processes and microbial community dynamics within the gastrointestinal ecosystem. Its Gram-positive nature and cocci morphology may influence its interactions with other microbial species and the host, potentially impacting nutrient absorption and overall gut health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF18-29
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF18-29
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF18-29 AF18-29.Scaf89, whole genome shotgun

Gene Summary

Adenine Count

893996 bp

Thymine Count

892223 bp

Guanine Count

661031 bp

Cytosine Count

656185 bp

Genome Length

3103685 bp

Protein-coding Genes

2862 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yqeg family had iiia-type phosphataseDWX11_08625Not AvailableNegative1834059 - 183453817704.0
30s ribosomal protein s21DWX11_08630Not AvailableNegative1834601 - 18347746748.26
leucine--trna ligaseDWX11_08635Not AvailableNegative1835033 - 183744191503.5
ribosome silencing factorDWX11_08640Not AvailableNegative1837478 - 183785514269.7
hd domain-containing proteinDWX11_08645Not AvailableNegative1837867 - 183844521315.7
nicotinate (nicotinamide) nucleotide adenylyltransferaseDWX11_08650Not AvailableNegative1838435 - 183905223385.4
yhby family rna-binding proteinDWX11_08655Not AvailableNegative1839052 - 183934810883.4
rdgb/ham1 family non-canonical purine ntp pyrophosphataseDWX11_08660Not AvailableNegative1839367 - 183994520922.8
cysteine hydrolaseDWX11_08665Not AvailableNegative1839956 - 184045618430.4
signal recognition particle-docking protein ftsyDWX11_08670Not AvailableNegative1840507 - 184141233019.1

Displaying genes 1791 – 1800 of 3013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.