Ruminococcus sp. AF18-29

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF18-29 is a Gram-positive bacterium characterized by its cocci shape. It possesses flagella, which may contribute to its motility in various environments. The organism has a single replicon, indicating a streamlined genomic structure. Its genetic information is cataloged under the accession number QTWT00000000.1. Ruminococcus species are often associated with the gastrointestinal tract of herbivores, playing a crucial role in the fermentation of complex carbohydrates, particularly in the breakdown of plant materials. The presence of flagella in Ruminococcus sp. AF18-29 suggests potential adaptability and mobility within its habitat, which could enhance its ability to colonize and thrive in the gut microbiome. Understanding the ecological role of Ruminococcus sp. AF18-29 can provide insights into its contributions to digestive processes and microbial community dynamics within the gastrointestinal ecosystem. Its Gram-positive nature and cocci morphology may influence its interactions with other microbial species and the host, potentially impacting nutrient absorption and overall gut health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF18-29
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF18-29
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF18-29 AF18-29.Scaf89, whole genome shotgun

Gene Summary

Adenine Count

893996 bp

Thymine Count

892223 bp

Guanine Count

661031 bp

Cytosine Count

656185 bp

Genome Length

3103685 bp

Protein-coding Genes

2862 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssra-binding protein smpbDWX11_04755Not AvailablePositive1024989 - 102545617989.1
Tmrna,resume consensus sequence (at 86): attagacgacaacgataaNot AvailableNot AvailablePositive1025460 - 1025819Not Available
sensor histidine kinaseDWX11_04765Not AvailableNegative1026176 - 102762455151.2
dna-binding response regulatorDWX11_04770Not AvailableNegative1027704 - 102837826068.9
atp-binding cassette domain-containing proteinDWX11_04775Not AvailableNegative1028779 - 1031706106787.0
dna-binding response regulatorDWX11_04780Not AvailablePositive1032839 - 103351626055.7
sensor histidine kinaseDWX11_04785Not AvailablePositive1033521 - 103459140266.3
cell filamentation protein ficDWX11_04790Not AvailableNegative1034641 - 103524923531.3
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDWX11_04795Not AvailableNegative1035274 - 103653945988.9
hypothetical proteinDWX11_04800Not AvailableNegative1036656 - 103774139644.9

Displaying genes 1061 – 1070 of 3013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.