Ruminococcus sp. AF18-29

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF18-29 is a Gram-positive bacterium characterized by its cocci shape. It possesses flagella, which may contribute to its motility in various environments. The organism has a single replicon, indicating a streamlined genomic structure. Its genetic information is cataloged under the accession number QTWT00000000.1. Ruminococcus species are often associated with the gastrointestinal tract of herbivores, playing a crucial role in the fermentation of complex carbohydrates, particularly in the breakdown of plant materials. The presence of flagella in Ruminococcus sp. AF18-29 suggests potential adaptability and mobility within its habitat, which could enhance its ability to colonize and thrive in the gut microbiome. Understanding the ecological role of Ruminococcus sp. AF18-29 can provide insights into its contributions to digestive processes and microbial community dynamics within the gastrointestinal ecosystem. Its Gram-positive nature and cocci morphology may influence its interactions with other microbial species and the host, potentially impacting nutrient absorption and overall gut health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF18-29
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF18-29
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF18-29 AF18-29.Scaf89, whole genome shotgun

Gene Summary

Adenine Count

893996 bp

Thymine Count

892223 bp

Guanine Count

661031 bp

Cytosine Count

656185 bp

Genome Length

3103685 bp

Protein-coding Genes

2862 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysine--trna ligaseDWX11_04655Not AvailablePositive1005219 - 100679060277.0
hypothetical proteinDWX11_04660Not AvailablePositive1006910 - 100751523227.2
peptidase s51DWX11_04665Not AvailablePositive1007723 - 100832522332.8
clbs/dfsb family four-helix bundle proteinDWX11_04670Not AvailablePositive1008380 - 100889820514.2
alpha/beta fold hydrolaseDWX11_04675Not AvailableNegative1009030 - 100982130382.5
duf1275 domain-containing proteinDWX11_04680Not AvailableNegative1010166 - 101085825944.3
lysr family transcriptional regulatorDWX11_04685Not AvailablePositive1011015 - 101191733775.9
duf4866 domain-containing proteinDWX11_04690Not AvailablePositive1011941 - 101273830225.4
threonine/serine exporter family proteinDWX11_04695Not AvailablePositive1012757 - 101408548009.7
arac family transcriptional regulatorDWX11_04700Not AvailablePositive1014180 - 10144199053.78

Displaying genes 1041 – 1050 of 3013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.