Roseburia sp. AF25-13LB

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF25-13LB is a rod-shaped bacterium notable for its single replicon, which is characteristic of its genomic structure. This organism possesses flagella, allowing for motility, which may play a role in its ecological interactions and habitat colonization. The presence of flagella suggests that Roseburia sp. AF25-13LB could navigate its environment effectively, potentially influencing its ability to thrive in specific niches. The bacterium is cataloged under the accession number QUFO00000000.1, which provides a reference point for researchers interested in studying its genetic and phenotypic characteristics. The significance of Roseburia sp. AF25-13LB extends into its potential applications and roles within various ecosystems, particularly in relation to human health. Members of the Roseburia genus are often associated with gut microbiota and are known to contribute to the fermentation of dietary fibers, leading to the production of short-chain fatty acids, which are beneficial for intestinal health. The unique traits of Roseburia sp. AF25-13LB, including its rod shape, motility due to flagella, and single replicon, position it as a significant player in microbial communities, especially in contexts such as gut microbiomes. Understanding its specific functions and interactions within these ecosystems could provide insights into its role in promoting gut health and overall well-being.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF25-13LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF25-13LB AF25-13LB.Scaf36, whole genome shotgun

Gene Summary

Adenine Count

960447 bp

Thymine Count

933547 bp

Guanine Count

673531 bp

Cytosine Count

638234 bp

Genome Length

3205849 bp

Protein-coding Genes

2935 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDWY37_13605Not AvailablePositive2844238 - 284555146200.3
phosphotriesterase-related proteinDWY37_13610Not AvailablePositive2845604 - 284651833906.8
aminotransferase class v-fold plp-dependent enzymeDWY37_13615Not AvailablePositive2846613 - 284763237207.3
yhfx family plp-dependent enzymeDWY37_13620Not AvailablePositive2847623 - 284878343230.8
phosphopentomutaseDWY37_13625Not AvailablePositive2848780 - 284999144561.6
glucosamine-6-phosphate deaminaseDWY37_13630Not AvailablePositive2850008 - 285073926973.5
6-phosphofructokinaseDWY37_13635Not AvailableNegative2850820 - 285206744931.5
deor/glpr transcriptional regulatorDWY37_13640Not AvailableNegative2852096 - 285288729519.7
hypothetical proteinDWY37_13645Not AvailablePositive2853225 - 285521373155.2
dihydroxyacetone kinase subunit lDWY37_13650Not AvailablePositive2855274 - 285701363673.1

Displaying genes 2651 – 2660 of 3035 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.