Roseburia sp. AF25-13LB

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF25-13LB is a rod-shaped bacterium notable for its single replicon, which is characteristic of its genomic structure. This organism possesses flagella, allowing for motility, which may play a role in its ecological interactions and habitat colonization. The presence of flagella suggests that Roseburia sp. AF25-13LB could navigate its environment effectively, potentially influencing its ability to thrive in specific niches. The bacterium is cataloged under the accession number QUFO00000000.1, which provides a reference point for researchers interested in studying its genetic and phenotypic characteristics. The significance of Roseburia sp. AF25-13LB extends into its potential applications and roles within various ecosystems, particularly in relation to human health. Members of the Roseburia genus are often associated with gut microbiota and are known to contribute to the fermentation of dietary fibers, leading to the production of short-chain fatty acids, which are beneficial for intestinal health. The unique traits of Roseburia sp. AF25-13LB, including its rod shape, motility due to flagella, and single replicon, position it as a significant player in microbial communities, especially in contexts such as gut microbiomes. Understanding its specific functions and interactions within these ecosystems could provide insights into its role in promoting gut health and overall well-being.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF25-13LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF25-13LB AF25-13LB.Scaf36, whole genome shotgun

Gene Summary

Adenine Count

960447 bp

Thymine Count

933547 bp

Guanine Count

673531 bp

Cytosine Count

638234 bp

Genome Length

3205849 bp

Protein-coding Genes

2935 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gnat family n-acetyltransferaseDWY37_13255Not AvailablePositive2780140 - 278060417513.1
nad-dependent epimerase/dehydratase family proteinDWY37_13260Not AvailablePositive2780641 - 278154034412.8
3-dehydroquinate synthaseDWY37_13265Not AvailablePositive2781682 - 278279741266.1
ggdef domain-containing proteinDWY37_13270Not AvailableNegative2783102 - 278546890926.0
Trna-proNot AvailableNot AvailablePositive2785587 - 2785663Not Available
methylglyoxal synthaseDWY37_13280Not AvailablePositive2785878 - 278635117381.9
hsp20/alpha crystallin family proteinDWY37_13285Not AvailableNegative2786482 - 278692216684.4
hsp20/alpha crystallin family proteinDWY37_13290Not AvailableNegative2787130 - 278759717811.2
sodium-dependent transporterDWY37_13295Not AvailablePositive2787980 - 278935349913.4
energy-coupled thiamine transporter thitDWY37_13300Not AvailableNegative2789535 - 279019123377.4

Displaying genes 2581 – 2590 of 3035 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.