Roseburia sp. AF25-13LB

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF25-13LB is a rod-shaped bacterium notable for its single replicon, which is characteristic of its genomic structure. This organism possesses flagella, allowing for motility, which may play a role in its ecological interactions and habitat colonization. The presence of flagella suggests that Roseburia sp. AF25-13LB could navigate its environment effectively, potentially influencing its ability to thrive in specific niches. The bacterium is cataloged under the accession number QUFO00000000.1, which provides a reference point for researchers interested in studying its genetic and phenotypic characteristics. The significance of Roseburia sp. AF25-13LB extends into its potential applications and roles within various ecosystems, particularly in relation to human health. Members of the Roseburia genus are often associated with gut microbiota and are known to contribute to the fermentation of dietary fibers, leading to the production of short-chain fatty acids, which are beneficial for intestinal health. The unique traits of Roseburia sp. AF25-13LB, including its rod shape, motility due to flagella, and single replicon, position it as a significant player in microbial communities, especially in contexts such as gut microbiomes. Understanding its specific functions and interactions within these ecosystems could provide insights into its role in promoting gut health and overall well-being.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF25-13LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF25-13LB AF25-13LB.Scaf36, whole genome shotgun

Gene Summary

Adenine Count

960447 bp

Thymine Count

933547 bp

Guanine Count

673531 bp

Cytosine Count

638234 bp

Genome Length

3205849 bp

Protein-coding Genes

2935 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombination protein recrDWY37_12580Not AvailableNegative2653466 - 265406222003.7
ybab/ebfc family nucleoid-associated proteinDWY37_12585Not AvailableNegative2654089 - 265444512486.0
dna polymerase iii subunit gamma/tauDWY37_12590Not AvailableNegative2654467 - 265602958589.6
6-phosphofructokinaseDWY37_12595Not AvailableNegative2656050 - 265712339033.2
aminoacyl-histidine dipeptidaseDWY37_12600Not AvailableNegative2657232 - 265867452547.9
pqqd family proteinDWY37_12605Not AvailableNegative2658674 - 265903614400.5
oligopeptide transporter, opt familyDWY37_12610Not AvailableNegative2659124 - 266103766178.0
Trna-serNot AvailableNot AvailablePositive2661219 - 2661304Not Available
cation diffusion facilitator family transporterDWY37_12620Not AvailableNegative2661379 - 266235336943.9
sensor histidine kinaseDWY37_12625Not AvailableNegative2662390 - 266353242771.1

Displaying genes 2451 – 2460 of 3035 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.