Roseburia sp. AF25-13LB

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF25-13LB is a rod-shaped bacterium notable for its single replicon, which is characteristic of its genomic structure. This organism possesses flagella, allowing for motility, which may play a role in its ecological interactions and habitat colonization. The presence of flagella suggests that Roseburia sp. AF25-13LB could navigate its environment effectively, potentially influencing its ability to thrive in specific niches. The bacterium is cataloged under the accession number QUFO00000000.1, which provides a reference point for researchers interested in studying its genetic and phenotypic characteristics. The significance of Roseburia sp. AF25-13LB extends into its potential applications and roles within various ecosystems, particularly in relation to human health. Members of the Roseburia genus are often associated with gut microbiota and are known to contribute to the fermentation of dietary fibers, leading to the production of short-chain fatty acids, which are beneficial for intestinal health. The unique traits of Roseburia sp. AF25-13LB, including its rod shape, motility due to flagella, and single replicon, position it as a significant player in microbial communities, especially in contexts such as gut microbiomes. Understanding its specific functions and interactions within these ecosystems could provide insights into its role in promoting gut health and overall well-being.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF25-13LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF25-13LB AF25-13LB.Scaf36, whole genome shotgun

Gene Summary

Adenine Count

960447 bp

Thymine Count

933547 bp

Guanine Count

673531 bp

Cytosine Count

638234 bp

Genome Length

3205849 bp

Protein-coding Genes

2935 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorDWY37_07390Not AvailablePositive1533808 - 153423916205.5
site-specific integraseDWY37_07395Not AvailablePositive1534297 - 153535241183.4
30s ribosomal protein s9DWY37_07405Not AvailableNegative1535687 - 153607914521.7
50s ribosomal protein l13DWY37_07410Not AvailableNegative1536096 - 153652416050.6
trna pseudouridine(38-40) synthase truaDWY37_07415Not AvailableNegative1536759 - 153749627458.1
energy-coupling factor transporter transmembrane protein ecftDWY37_07420Not AvailableNegative1537568 - 153842231865.8
energy-coupling factor transporter atpaseDWY37_07425Not AvailableNegative1538416 - 153928532273.7
energy-coupling factor transporter atpaseDWY37_07430Not AvailableNegative1539273 - 154013031785.3
trna (cytidine(34)-2'-o)-methyltransferaseDWY37_07435Not AvailableNegative1540142 - 154063919015.9
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDWY37_07440Not AvailableNegative1540626 - 154180744272.3

Displaying genes 1451 – 1460 of 3035 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.