Roseburia sp. AF25-13LB

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF25-13LB is a rod-shaped bacterium notable for its single replicon, which is characteristic of its genomic structure. This organism possesses flagella, allowing for motility, which may play a role in its ecological interactions and habitat colonization. The presence of flagella suggests that Roseburia sp. AF25-13LB could navigate its environment effectively, potentially influencing its ability to thrive in specific niches. The bacterium is cataloged under the accession number QUFO00000000.1, which provides a reference point for researchers interested in studying its genetic and phenotypic characteristics. The significance of Roseburia sp. AF25-13LB extends into its potential applications and roles within various ecosystems, particularly in relation to human health. Members of the Roseburia genus are often associated with gut microbiota and are known to contribute to the fermentation of dietary fibers, leading to the production of short-chain fatty acids, which are beneficial for intestinal health. The unique traits of Roseburia sp. AF25-13LB, including its rod shape, motility due to flagella, and single replicon, position it as a significant player in microbial communities, especially in contexts such as gut microbiomes. Understanding its specific functions and interactions within these ecosystems could provide insights into its role in promoting gut health and overall well-being.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF25-13LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF25-13LB AF25-13LB.Scaf36, whole genome shotgun

Gene Summary

Adenine Count

960447 bp

Thymine Count

933547 bp

Guanine Count

673531 bp

Cytosine Count

638234 bp

Genome Length

3205849 bp

Protein-coding Genes

2935 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prgi family proteinDWY37_05570Not AvailablePositive1150362 - 115076915190.0
conjugal transfer protein traeDWY37_05575Not AvailablePositive1150717 - 115321295119.5
peptidaseDWY37_05580Not AvailablePositive1153212 - 115580696266.3
duf4315 family proteinDWY37_05585Not AvailablePositive1155822 - 115607910026.2
duf4366 domain-containing proteinDWY37_05590Not AvailablePositive1156057 - 115764958572.1
type ia dna topoisomeraseDWY37_05595Not AvailablePositive1157650 - 115976179104.6
hypothetical proteinDWY37_05600Not AvailablePositive1159777 - 116004310296.2
xre family transcriptional regulatorDWY37_05605Not AvailablePositive1160057 - 116039212259.0
duf3849 domain-containing proteinDWY37_05610Not AvailablePositive1160465 - 1169107326550.0
dna-binding response regulatorDWY37_05615Not AvailablePositive1169288 - 117001327981.6

Displaying genes 1101 – 1110 of 3035 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.