Roseburia sp. AF12-17LB

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF12-17LB is a Gram-positive bacterium characterized by its rod shape. This organism possesses flagella, which may contribute to its motility in various environments. Notably, it contains a single replicon, indicating a streamlined genetic organization that may facilitate its adaptation and replication. The accession number for Roseburia sp. AF12-17LB is QUHR00000000.1, which provides a reference for its genomic data. This specific strain belongs to the genus Roseburia, which is known for its role in the human gut microbiome. Roseburia species are typically associated with beneficial effects on host health, such as the fermentation of dietary fibers and the production of short-chain fatty acids (SCFAs). These metabolic products are crucial for maintaining gut health and influencing systemic inflammation. The presence of flagella in Roseburia sp. AF12-17LB may also enhance its ability to interact with the gut environment, potentially impacting its ecological niche and its interactions with other microbiota. In summary, Roseburia sp. AF12-17LB, with its Gram-positive, rod-shaped structure, motility due to flagella, and single replicon, is positioned to play a significant role in the gut microbiome, contributing to metabolic processes that support gut health and overall well-being.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF12-17LB
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Roseburia sp. AF12-17LB
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF12-17LB AF12-17LB.Scaf35, whole genome shotgun

Gene Summary

Adenine Count

902556 bp

Thymine Count

860817 bp

Guanine Count

629830 bp

Cytosine Count

578505 bp

Genome Length

2971866 bp

Protein-coding Genes

2705 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
low molecular weight phosphotyrosine protein phosphataseDWV68_12730Not AvailablePositive2696065 - 269655618385.9
duf1835 domain-containing proteinDWV68_12735Not AvailablePositive2696557 - 269745034545.2
diguanylate cyclaseDWV68_12740Not AvailablePositive2697457 - 269797819027.0
aspartate--trna ligaseDWV68_12745Not AvailablePositive2698384 - 270012966422.0
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcDWV68_12750Not AvailablePositive2700142 - 270043810914.8
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataDWV68_12755Not AvailablePositive2700454 - 270191752104.1
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbDWV68_12760Not AvailablePositive2701932 - 270336253721.9
site-specific integraseDWV68_12765Not AvailablePositive2703634 - 270456635872.5
type i restriction endonuclease subunit rDWV68_12770Not AvailableNegative2704631 - 2707591114168.0
restriction endonuclease subunit sDWV68_12780Not AvailableNegative2708787 - 270942224120.9

Displaying genes 2471 – 2480 of 2761 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.