Roseburia sp. AF02-12

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF02-12 is a rod-shaped bacterium that possesses flagella, which may contribute to its motility in various environments. This species has a single replicon, indicating a streamlined genetic structure that could facilitate efficient replication and adaptation. The accession number for this strain is QTXS00000000.1, which serves as a reference for genetic and genomic studies. The presence of flagella in Roseburia sp. AF02-12 suggests that it may play a role in the gut microbiota, where motility can be advantageous for navigating the complex environment of the intestinal tract. As a member of the Roseburia genus, this bacterium is likely involved in the fermentation of dietary fibers, contributing to the production of short-chain fatty acids, which are important for gut health and host metabolism. Understanding the characteristics of Roseburia sp. AF02-12 enhances our knowledge of its potential ecological role within the gut microbiome. Its motility may allow it to effectively colonize niches and interact with other microorganisms, thereby influencing the overall microbiome composition and function. Further studies on this bacterium can provide insights into its contributions to health and disease, particularly regarding its role in fiber fermentation and metabolic processes in the gastrointestinal tract.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF02-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF02-12 AF02-12.Scaf10, whole genome shotgun

Gene Summary

Adenine Count

883406 bp

Thymine Count

890540 bp

Guanine Count

611122 bp

Cytosine Count

613287 bp

Genome Length

3005736 bp

Protein-coding Genes

2728 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exonuclease sbccd subunit dDV740_00155Not AvailablePositive35869 - 3702644233.0
smc family atpaseDV740_00160Not AvailablePositive37023 - 40202121957.0
tetr family transcriptional regulatorDV740_00165Not AvailableNegative40194 - 4074221625.2
degv family proteinDV740_00170Not AvailablePositive41452 - 4230931089.7
abc transporter permeaseDV740_00175Not AvailablePositive42589 - 4412457121.7
atp-binding proteinDV740_00180Not AvailablePositive44133 - 4449213113.8
had family phosphataseDV740_00185Not AvailablePositive44523 - 4517024352.6
ggdef domain-containing proteinDV740_00190Not AvailablePositive45186 - 4623539460.5
duf1311 domain-containing proteinDV740_00195Not AvailablePositive46287 - 4735439637.4
guanosine polyphosphate pyrophosphohydrolaseDV740_00200Not AvailablePositive47377 - 4836638860.3

Displaying genes 121 – 130 of 2841 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.