Parabacteroides sp. OF04-13BH

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. OF04-13BH is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism has a single replicon, indicating a streamlined genomic structure that can be advantageous for its adaptability and replication within its ecological niche. The accession number for this strain is QTMV00000000.1, which serves as a reference for genomic and taxonomic studies. The rod shape of Parabacteroides sp. OF04-13BH is typical for members of the genus Parabacteroides, which are known for their role in the gut microbiome of various hosts. The presence of flagella may facilitate movement within the mucosal environment of the gut, allowing the bacterium to navigate and colonize effectively. This motility can enhance its ability to interact with other microbial communities and host tissues, contributing to its ecological role. Understanding the traits and characteristics of Parabacteroides sp. OF04-13BH provides insights into its potential functions within the microbiome. Bacteria of this genus are often involved in the fermentation of complex carbohydrates, leading to the production of short-chain fatty acids that are beneficial for host health. Therefore, Parabacteroides sp. OF04-13BH may play a significant role in maintaining gut health and influencing the overall balance of the microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. OF04-13BH
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. OF04-13BH OF04-13BH.Scaf79, whole genome

Gene Summary

Adenine Count

1492415 bp

Thymine Count

1475824 bp

Guanine Count

1196570 bp

Cytosine Count

1221366 bp

Genome Length

5386382 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent endonucleaseDXA72_00310Not AvailablePositive90206 - 9162154093.9
hypothetical proteinDXA72_00315Not AvailablePositive91731 - 9242626805.3
16s rrna (cytidine(1402)-2'-o)-methyltransferaseDXA72_00320Not AvailablePositive92436 - 9314026308.9
hypothetical proteinDXA72_00325Not AvailablePositive93160 - 9403232611.7
noncanonical pyrimidine nucleotidase, yjjg familyDXA72_00330Not AvailablePositive94032 - 9472427033.2
fad:protein fmn transferaseDXA72_00335Not AvailableNegative94856 - 9586337749.2
peptide chain release factor 3DXA72_00340Not AvailableNegative95865 - 9744560146.0
dtdp-4-dehydrorhamnose reductaseDXA72_00345Not AvailableNegative97475 - 9833832090.3
duf4924 family proteinDXA72_00350Not AvailableNegative98353 - 9890121288.0
udp-n-acetylmuramate--alanine ligaseDXA72_00355Not AvailableNegative98898 - 9982434689.8

Displaying genes 61 – 70 of 4478 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.