Parabacteroides sp. OF04-13BH

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. OF04-13BH is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism has a single replicon, indicating a streamlined genomic structure that can be advantageous for its adaptability and replication within its ecological niche. The accession number for this strain is QTMV00000000.1, which serves as a reference for genomic and taxonomic studies. The rod shape of Parabacteroides sp. OF04-13BH is typical for members of the genus Parabacteroides, which are known for their role in the gut microbiome of various hosts. The presence of flagella may facilitate movement within the mucosal environment of the gut, allowing the bacterium to navigate and colonize effectively. This motility can enhance its ability to interact with other microbial communities and host tissues, contributing to its ecological role. Understanding the traits and characteristics of Parabacteroides sp. OF04-13BH provides insights into its potential functions within the microbiome. Bacteria of this genus are often involved in the fermentation of complex carbohydrates, leading to the production of short-chain fatty acids that are beneficial for host health. Therefore, Parabacteroides sp. OF04-13BH may play a significant role in maintaining gut health and influencing the overall balance of the microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. OF04-13BH
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. OF04-13BH OF04-13BH.Scaf79, whole genome

Gene Summary

Adenine Count

1492415 bp

Thymine Count

1475824 bp

Guanine Count

1196570 bp

Cytosine Count

1221366 bp

Genome Length

5386382 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tolc family proteinDXA72_15455Not AvailableNegative3734113 - 373538747811.4
cusa/czca family heavy metal efflux rnd transporterDXA72_15460Not AvailableNegative3735416 - 3738529114653.0
efflux rnd transporter periplasmic adaptor subunitDXA72_15465Not AvailableNegative3738536 - 373964541139.9
hypothetical proteinDXA72_15470Not AvailableNegative3739694 - 374005313644.1
m20/m25/m40 family metallo-hydrolaseDXA72_15475Not AvailablePositive3740182 - 374172957910.3
Trna-hisNot AvailableNot AvailablePositive3741869 - 3741945Not Available
Trna-hisNot AvailableNot AvailablePositive3742036 - 3742111Not Available
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolaseDXA72_15490Not AvailableNegative3742210 - 374310632442.8
signal recognition particle proteinDXA72_15495Not AvailableNegative3743129 - 374446649140.9
cadmium-translocating p-type atpaseDXA72_15500Not AvailableNegative3744568 - 374647868814.8

Displaying genes 3011 – 3020 of 4478 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.