Parabacteroides sp. OF04-13BH

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. OF04-13BH is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism has a single replicon, indicating a streamlined genomic structure that can be advantageous for its adaptability and replication within its ecological niche. The accession number for this strain is QTMV00000000.1, which serves as a reference for genomic and taxonomic studies. The rod shape of Parabacteroides sp. OF04-13BH is typical for members of the genus Parabacteroides, which are known for their role in the gut microbiome of various hosts. The presence of flagella may facilitate movement within the mucosal environment of the gut, allowing the bacterium to navigate and colonize effectively. This motility can enhance its ability to interact with other microbial communities and host tissues, contributing to its ecological role. Understanding the traits and characteristics of Parabacteroides sp. OF04-13BH provides insights into its potential functions within the microbiome. Bacteria of this genus are often involved in the fermentation of complex carbohydrates, leading to the production of short-chain fatty acids that are beneficial for host health. Therefore, Parabacteroides sp. OF04-13BH may play a significant role in maintaining gut health and influencing the overall balance of the microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. OF04-13BH
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. OF04-13BH OF04-13BH.Scaf79, whole genome

Gene Summary

Adenine Count

1492415 bp

Thymine Count

1475824 bp

Guanine Count

1196570 bp

Cytosine Count

1221366 bp

Genome Length

5386382 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
esteraseDXA72_01375Not AvailablePositive364342 - 36553544806.9
dna-binding response regulatorDXA72_01380Not AvailableNegative365601 - 36629626506.2
histidine kinaseDXA72_01385Not AvailableNegative366293 - 36735141968.3
tonb-dependent receptorDXA72_01390Not AvailableNegative367372 - 36953181570.9
hypothetical proteinDXA72_01395Not AvailablePositive370364 - 3705647580.47
type ii toxin-antitoxin system yafq family toxinDXA72_01400Not AvailablePositive370615 - 3708398568.38
hypothetical proteinDXA72_01405Not AvailableNegative370836 - 3710216547.76
gtp cyclohydrolase i foleDXA72_01415Not AvailableNegative372278 - 37286822730.8
spor domain-containing proteinDXA72_01420Not AvailableNegative372874 - 37338019302.6
triose-phosphate isomeraseDXA72_01425Not AvailableNegative373451 - 37420626445.6

Displaying genes 271 – 280 of 4478 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.