Parabacteroides sp. AM44-16

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AM44-16 is characterized as a rod-shaped bacterium. It possesses flagella, which suggests a capability for motility. This feature may play a significant role in its ecological interactions, as motility can enhance the organism's ability to navigate its environment and potentially colonize host tissues or interact with other microbial species. The genome of Parabacteroides sp. AM44-16 is noted to have a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in resource utilization. The accessions for this strain are cataloged under QTNC00000000.1, making it accessible for further genomic studies and comparisons with related species. Biologically, the presence of a single replicon could suggest a specialization in certain environments, potentially allowing Parabacteroides sp. AM44-16 to thrive in specific ecological niches. Its motility, combined with its genetic configuration, may allow this bacterium to effectively compete for resources and establish interactions within its microbial community. Understanding these traits can provide insights into the role of Parabacteroides sp. AM44-16 in its ecosystem, particularly in relation to its potential functions in digestion and nutrient cycling within host organisms or its contributions to microbiome diversity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AM44-16
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AM44-16 AM44-16.Scaf94, whole genome shotgun

Gene Summary

Adenine Count

1492170 bp

Thymine Count

1492251 bp

Guanine Count

1209610 bp

Cytosine Count

1225952 bp

Genome Length

5419983 bp

Protein-coding Genes

3919 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinDW945_10015Not AvailableNegative2408335 - 240983156337.9
tonb-dependent receptorDW945_10020Not AvailableNegative2409856 - 2412897111939.0
glycoside hydrolase family 16 proteinDW945_10030Not AvailableNegative2416181 - 241701131921.2
hypothetical proteinDW945_10035Not AvailablePositive2417071 - 24172807819.43
Trna-glnNot AvailableNot AvailablePositive2417282 - 2417352Not Available
tyrosine--trna ligaseDW945_10045Not AvailableNegative2417425 - 241871748354.9
hydrolase tatdDW945_10050Not AvailableNegative2418821 - 241949225301.8
membrane protein insertion efficiency factor yiddDW945_10055Not AvailableNegative2419476 - 24196978385.43
ribonuclease p protein componentDW945_10060Not AvailableNegative2419697 - 242008315382.3
uroporphyrinogen-iii synthaseDW945_10065Not AvailableNegative2420083 - 242084428847.1

Displaying genes 1711 – 1720 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.