Parabacteroides sp. AF19-14

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF19-14 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in various environments. The organism has a single replicon, indicating a streamlined genomic structure that could be advantageous for efficient replication and adaptation. The genomic sequence of Parabacteroides sp. AF19-14 is cataloged under the accession number QTMJ00000000.1, providing a reference for further studies and comparisons within the genus. Parabacteroides species are known to be part of the human gut microbiota and play a role in the digestion of complex carbohydrates, contributing to overall gut health and metabolism. The motility conferred by flagella may enhance the bacterium's ability to colonize various niches within the gut environment, potentially influencing microbial community dynamics. This adaptation might allow Parabacteroides sp. AF19-14 to effectively interact with host factors and other microbial species, supporting its ecological role in the gut. Understanding the traits and genomic characteristics of Parabacteroides sp. AF19-14 can provide insights into its functional roles in the microbiome, highlighting its potential contributions to gut health and the broader ecosystem of microbial interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF19-14
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF19-14 AF19-14.Scaf66, whole genome shotgun

Gene Summary

Adenine Count

1449064 bp

Thymine Count

1415781 bp

Guanine Count

1143067 bp

Cytosine Count

1208502 bp

Genome Length

5216724 bp

Protein-coding Genes

4197 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heparan n-sulfataseDWX33_02060Not AvailableNegative465858 - 46727954545.9
ragb/susd family nutrient uptake outer membrane proteinDWX33_02065Not AvailableNegative467295 - 46873754810.5
susc/raga family tonb-linked outer membrane proteinDWX33_02070Not AvailableNegative468749 - 472180127904.0
duf4974 domain-containing proteinDWX33_02075Not AvailableNegative472364 - 47342240476.4
rna polymerase sigma-70 factorDWX33_02080Not AvailablePositive473746 - 47429721796.3
tonb-dependent receptorDWX33_02085Not AvailablePositive474428 - 477247104179.0
sensor histidine kinaseDWX33_02090Not AvailablePositive477512 - 47907159397.0
dna-binding response regulatorDWX33_02095Not AvailablePositive479074 - 47980527904.1
carbon starvation protein aDWX33_02100Not AvailableNegative479859 - 48126851557.9
gatb/yqey domain-containing proteinDWX33_02105Not AvailableNegative481384 - 48183316395.1

Displaying genes 441 – 450 of 4299 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.