Parabacteroides sp. AF19-14

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF19-14 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in various environments. The organism has a single replicon, indicating a streamlined genomic structure that could be advantageous for efficient replication and adaptation. The genomic sequence of Parabacteroides sp. AF19-14 is cataloged under the accession number QTMJ00000000.1, providing a reference for further studies and comparisons within the genus. Parabacteroides species are known to be part of the human gut microbiota and play a role in the digestion of complex carbohydrates, contributing to overall gut health and metabolism. The motility conferred by flagella may enhance the bacterium's ability to colonize various niches within the gut environment, potentially influencing microbial community dynamics. This adaptation might allow Parabacteroides sp. AF19-14 to effectively interact with host factors and other microbial species, supporting its ecological role in the gut. Understanding the traits and genomic characteristics of Parabacteroides sp. AF19-14 can provide insights into its functional roles in the microbiome, highlighting its potential contributions to gut health and the broader ecosystem of microbial interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF19-14
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF19-14 AF19-14.Scaf66, whole genome shotgun

Gene Summary

Adenine Count

1449064 bp

Thymine Count

1415781 bp

Guanine Count

1143067 bp

Cytosine Count

1208502 bp

Genome Length

5216724 bp

Protein-coding Genes

4197 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyltransferaseDWX33_00915Not AvailableNegative215522 - 21639732676.0
agmatine deiminase family proteinDWX33_00920Not AvailableNegative216417 - 21744539216.4
mate family efflux transporterDWX33_00925Not AvailableNegative217435 - 21878448610.2
crispr-associated helicase cas3'DWX33_00930Not AvailablePositive218852 - 22107784262.3
type i-c crispr-associated protein cas5DWX33_00935Not AvailablePositive221093 - 22177326639.0
type i-c crispr-associated protein cas8c/csd1DWX33_00940Not AvailablePositive221770 - 22347964309.3
type i-c crispr-associated protein cas7/csd2DWX33_00945Not AvailablePositive223506 - 22438432235.4
crispr-associated protein cas4DWX33_00950Not AvailablePositive224396 - 22506125894.3
type i-c crispr-associated endonuclease cas1DWX33_00955Not AvailablePositive225058 - 22608038680.1
crispr-associated endonuclease cas2DWX33_00960Not AvailablePositive226090 - 22638011135.6

Displaying genes 221 – 230 of 4299 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.