Parabacteroides sp. AF19-14

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF19-14 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in various environments. The organism has a single replicon, indicating a streamlined genomic structure that could be advantageous for efficient replication and adaptation. The genomic sequence of Parabacteroides sp. AF19-14 is cataloged under the accession number QTMJ00000000.1, providing a reference for further studies and comparisons within the genus. Parabacteroides species are known to be part of the human gut microbiota and play a role in the digestion of complex carbohydrates, contributing to overall gut health and metabolism. The motility conferred by flagella may enhance the bacterium's ability to colonize various niches within the gut environment, potentially influencing microbial community dynamics. This adaptation might allow Parabacteroides sp. AF19-14 to effectively interact with host factors and other microbial species, supporting its ecological role in the gut. Understanding the traits and genomic characteristics of Parabacteroides sp. AF19-14 can provide insights into its functional roles in the microbiome, highlighting its potential contributions to gut health and the broader ecosystem of microbial interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF19-14
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF19-14 AF19-14.Scaf66, whole genome shotgun

Gene Summary

Adenine Count

1449064 bp

Thymine Count

1415781 bp

Guanine Count

1143067 bp

Cytosine Count

1208502 bp

Genome Length

5216724 bp

Protein-coding Genes

4197 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta-agaraseDWX33_06795Not AvailablePositive1587086 - 1592431189788.0
pin domain-containing proteinDWX33_06800Not AvailablePositive1592762 - 159318416290.6
abc transporter permeaseDWX33_06805Not AvailablePositive1593352 - 159423033074.6
duf3098 domain-containing proteinDWX33_06810Not AvailablePositive1594258 - 15944978499.63
undecaprenyl-diphosphate phosphataseDWX33_06815Not AvailablePositive1594494 - 159529428519.0
trna pseudouridine(55) synthase trubDWX33_06820Not AvailablePositive1595298 - 159600526675.6
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaDWX33_06825Not AvailablePositive1596018 - 159706739927.9
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseDWX33_06830Not AvailablePositive1597078 - 159753616964.7
hypothetical proteinDWX33_06835Not AvailablePositive1597567 - 15977617207.79
s-adenosylmethionine synthaseDWX33_06840Not AvailablePositive1597950 - 159923647347.4

Displaying genes 1321 – 1330 of 4299 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.