Parabacteroides sp. AF19-14

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF19-14 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in various environments. The organism has a single replicon, indicating a streamlined genomic structure that could be advantageous for efficient replication and adaptation. The genomic sequence of Parabacteroides sp. AF19-14 is cataloged under the accession number QTMJ00000000.1, providing a reference for further studies and comparisons within the genus. Parabacteroides species are known to be part of the human gut microbiota and play a role in the digestion of complex carbohydrates, contributing to overall gut health and metabolism. The motility conferred by flagella may enhance the bacterium's ability to colonize various niches within the gut environment, potentially influencing microbial community dynamics. This adaptation might allow Parabacteroides sp. AF19-14 to effectively interact with host factors and other microbial species, supporting its ecological role in the gut. Understanding the traits and genomic characteristics of Parabacteroides sp. AF19-14 can provide insights into its functional roles in the microbiome, highlighting its potential contributions to gut health and the broader ecosystem of microbial interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF19-14
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF19-14 AF19-14.Scaf66, whole genome shotgun

Gene Summary

Adenine Count

1449064 bp

Thymine Count

1415781 bp

Guanine Count

1143067 bp

Cytosine Count

1208502 bp

Genome Length

5216724 bp

Protein-coding Genes

4197 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr03905 family tscpd domain-containing proteinDWX33_05565Not AvailableNegative1306204 - 13064619181.22
bifunctional folylpolyglutamate synthase/dihydrofolate synthaseDWX33_05570Not AvailablePositive1306545 - 130786148500.6
mfs transporterDWX33_05575Not AvailablePositive1307885 - 130930052152.6
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseDWX33_05580Not AvailablePositive1310094 - 131090929805.8
class i sam-dependent methyltransferaseDWX33_05585Not AvailablePositive1310906 - 131148722228.1
s9 family peptidaseDWX33_05590Not AvailablePositive1311499 - 131399193003.1
carboxymuconolactone decarboxylaseDWX33_05595Not AvailablePositive1314190 - 131534443112.4
malate dehydrogenaseDWX33_05600Not AvailableNegative1315429 - 131643035810.3
ygiq family radical sam proteinDWX33_05605Not AvailablePositive1316585 - 131843570619.4
rida family proteinDWX33_05610Not AvailableNegative1318562 - 131894213266.1

Displaying genes 1081 – 1090 of 4299 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.