Coprobacillus sp. AM29-13

Kingdom

Bacillati

Phylum

Bacillota

Class

Erysipelotrichia

Order

Erysipelotrichales

Family

Coprobacillaceae

Genus

Coprobacillus

Description

Coprobacillus sp. AM29-13 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number QUJG00000000.1, providing a reference point for genetic and taxonomic studies. This bacterium belongs to a group commonly associated with the gastrointestinal tract of various hosts, playing a role in the microbial ecosystem. The presence of Coprobacillus species often suggests a relationship with the fermentation of complex carbohydrates, contributing to gut health and metabolic processes. Research on Coprobacillus sp. AM29-13 may provide insights into its functional capabilities within its ecological niche. Since it is part of a diverse microbiome, understanding its traits could help elucidate its role in digestion, nutrient absorption, and interactions with other microbial populations. Further investigations into its metabolic pathways might reveal its contributions to the overall health of the host organism and its environmental adaptations. In summary, Coprobacillus sp. AM29-13, with its single replicon and specific genetic accession, represents a significant microbial entity that could enhance our understanding of gastrointestinal microbiomes and their ecological functions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassErysipelotrichia
OrderErysipelotrichales
FamilyCoprobacillaceae
GenusCoprobacillus
SpeciesCoprobacillus sp. AM29-13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacillus sp. AM29-13 AM29-13.Scaf61, whole genome shotgun

Gene Summary

Adenine Count

1043532 bp

Thymine Count

1044568 bp

Guanine Count

450954 bp

Cytosine Count

435794 bp

Genome Length

2975043 bp

Protein-coding Genes

2887 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorDW760_04190Not AvailableNegative794650 - 79498513084.7
u32 family peptidaseDW760_04195Not AvailableNegative795091 - 79739489582.3
5'-methylthioadenosine/adenosylhomocysteine nucleosidaseDW760_04200Not AvailableNegative797406 - 79809224968.1
class i sam-dependent methyltransferaseDW760_04205Not AvailableNegative798097 - 79881027942.0
ribosome silencing factorDW760_04210Not AvailableNegative798810 - 79915113224.0
nicotinate-nucleotide adenylyltransferaseDW760_04215Not AvailableNegative799144 - 80024142406.7
ribosome assembly rna-binding protein yhbyDW760_04220Not AvailableNegative800238 - 80052511036.4
ribosome biogenesis gtpase yqehDW760_04225Not AvailableNegative800539 - 80163341739.6
sigma-70 family rna polymerase sigma factorDW760_04230Not AvailablePositive801769 - 80245826476.3
dna topoisomerase iv subunit aDW760_04235Not AvailableNegative802474 - 80509299473.1

Displaying genes 881 – 890 of 2980 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.