Coprobacillus sp. AM28-15LB

Kingdom

Bacillati

Phylum

Bacillota

Class

Erysipelotrichia

Order

Erysipelotrichales

Family

Coprobacillaceae

Genus

Coprobacillus

Description

Coprobacillus sp. AM28-15LB is a bacterial strain characterized by a single replicon, indicating that it possesses a singular circular chromosome as its genetic material. The strain is cataloged under the accession number QUJO00000000.1, which serves as a unique identifier for its genomic data in biological databases. The presence of only one replicon suggests a straightforward genomic organization, which can have implications for its replication and maintenance mechanisms. This trait may influence the strain's adaptability in various environments, especially those rich in organic materials, as Coprobacillus species are often associated with the gastrointestinal tracts of animals. In terms of ecological significance, members of the Coprobacillus genus are known to play a role in the digestion of complex carbohydrates, contributing to the breakdown of dietary fibers and the fermentation of organic matter. This function can enhance nutrient availability for host organisms and influence the overall microbiota composition in their respective habitats. Furthermore, the unique identification of Coprobacillus sp. AM28-15LB may provide insights into its specific ecological niche and metabolic capabilities. Understanding the traits of this strain can contribute to broader knowledge regarding microbial diversity and its impact on ecosystem dynamics, particularly in the context of gut microbiomes and their interactions with host metabolism.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassErysipelotrichia
OrderErysipelotrichales
FamilyCoprobacillaceae
GenusCoprobacillus
SpeciesCoprobacillus sp. AM28-15LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacillus sp. AM28-15LB AM28-15LB.Scaf335, whole genome

Gene Summary

Adenine Count

1180274 bp

Thymine Count

1156360 bp

Guanine Count

530406 bp

Cytosine Count

505587 bp

Genome Length

3376566 bp

Protein-coding Genes

3347 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit betaDW736_02995Not AvailablePositive582909 - 58401841739.4
s4 domain-containing protein yaaaDW736_03000Not AvailablePositive584218 - 5844338195.94
dna replication/repair protein recfDW736_03005Not AvailablePositive584420 - 58550842672.8
dna topoisomerase (atp-hydrolyzing) subunit bDW736_03010Not AvailablePositive585508 - 58743672265.0
dna gyrase subunit aDW736_03015Not AvailablePositive587449 - 58991792595.9
duf4186 domain-containing proteinDW736_03020Not AvailablePositive589934 - 59029914311.4
serine--trna ligaseDW736_03025Not AvailablePositive590348 - 59163448994.7
gnat family n-acetyltransferaseDW736_03030Not AvailablePositive591675 - 59218119613.6
nucleoside deaminaseDW736_03040Not AvailablePositive592312 - 59276417545.4
dna polymerase iii subunit gamma/tauDW736_03045Not AvailablePositive592815 - 59461769076.1

Displaying genes 711 – 720 of 3490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.