Coprobacillus sp. AM28-15LB

Kingdom

Bacillati

Phylum

Bacillota

Class

Erysipelotrichia

Order

Erysipelotrichales

Family

Coprobacillaceae

Genus

Coprobacillus

Description

Coprobacillus sp. AM28-15LB is a bacterial strain characterized by a single replicon, indicating that it possesses a singular circular chromosome as its genetic material. The strain is cataloged under the accession number QUJO00000000.1, which serves as a unique identifier for its genomic data in biological databases. The presence of only one replicon suggests a straightforward genomic organization, which can have implications for its replication and maintenance mechanisms. This trait may influence the strain's adaptability in various environments, especially those rich in organic materials, as Coprobacillus species are often associated with the gastrointestinal tracts of animals. In terms of ecological significance, members of the Coprobacillus genus are known to play a role in the digestion of complex carbohydrates, contributing to the breakdown of dietary fibers and the fermentation of organic matter. This function can enhance nutrient availability for host organisms and influence the overall microbiota composition in their respective habitats. Furthermore, the unique identification of Coprobacillus sp. AM28-15LB may provide insights into its specific ecological niche and metabolic capabilities. Understanding the traits of this strain can contribute to broader knowledge regarding microbial diversity and its impact on ecosystem dynamics, particularly in the context of gut microbiomes and their interactions with host metabolism.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassErysipelotrichia
OrderErysipelotrichales
FamilyCoprobacillaceae
GenusCoprobacillus
SpeciesCoprobacillus sp. AM28-15LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacillus sp. AM28-15LB AM28-15LB.Scaf335, whole genome

Gene Summary

Adenine Count

1180274 bp

Thymine Count

1156360 bp

Guanine Count

530406 bp

Cytosine Count

505587 bp

Genome Length

3376566 bp

Protein-coding Genes

3347 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
septum formation initiator family proteinDW736_17410Not AvailableNegative3254518 - 325482612249.6
hypothetical proteinDW736_17415Not AvailablePositive3254965 - 325587835636.3
hypothetical proteinDW736_17425Not AvailableNegative3256790 - 325727319004.8
hypothetical proteinDW736_17430Not AvailableNegative3257697 - 325800212399.0
type vi secretion system transmembrane protein tssqDW736_17435Not AvailableNegative3258014 - 325851719377.8
hypothetical proteinDW736_17440Not AvailableNegative3258598 - 325949332020.4
xre family transcriptional regulatorDW736_17445Not AvailableNegative3259641 - 32598538188.3
xre family transcriptional regulatorDW736_17450Not AvailablePositive3260027 - 326038213603.1
duf4434 domain-containing proteinDW736_17455Not AvailableNegative3260383 - 326097723035.2
sialate o-acetylesteraseDW736_17460Not AvailableNegative3260974 - 326126910753.2

Displaying genes 3311 – 3320 of 3490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.