Coprobacillus sp. AM28-15LB

Kingdom

Bacillati

Phylum

Bacillota

Class

Erysipelotrichia

Order

Erysipelotrichales

Family

Coprobacillaceae

Genus

Coprobacillus

Description

Coprobacillus sp. AM28-15LB is a bacterial strain characterized by a single replicon, indicating that it possesses a singular circular chromosome as its genetic material. The strain is cataloged under the accession number QUJO00000000.1, which serves as a unique identifier for its genomic data in biological databases. The presence of only one replicon suggests a straightforward genomic organization, which can have implications for its replication and maintenance mechanisms. This trait may influence the strain's adaptability in various environments, especially those rich in organic materials, as Coprobacillus species are often associated with the gastrointestinal tracts of animals. In terms of ecological significance, members of the Coprobacillus genus are known to play a role in the digestion of complex carbohydrates, contributing to the breakdown of dietary fibers and the fermentation of organic matter. This function can enhance nutrient availability for host organisms and influence the overall microbiota composition in their respective habitats. Furthermore, the unique identification of Coprobacillus sp. AM28-15LB may provide insights into its specific ecological niche and metabolic capabilities. Understanding the traits of this strain can contribute to broader knowledge regarding microbial diversity and its impact on ecosystem dynamics, particularly in the context of gut microbiomes and their interactions with host metabolism.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassErysipelotrichia
OrderErysipelotrichales
FamilyCoprobacillaceae
GenusCoprobacillus
SpeciesCoprobacillus sp. AM28-15LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacillus sp. AM28-15LB AM28-15LB.Scaf335, whole genome

Gene Summary

Adenine Count

1180274 bp

Thymine Count

1156360 bp

Guanine Count

530406 bp

Cytosine Count

505587 bp

Genome Length

3376566 bp

Protein-coding Genes

3347 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide pyrophosphohydrolaseDW736_00920Not AvailablePositive175488 - 17583813654.6
hypothetical proteinDW736_00925Not AvailablePositive175826 - 17631419318.4
nad-dependent epimerase/dehydratase family proteinDW736_00930Not AvailablePositive176376 - 17725433573.5
alpha/beta hydrolaseDW736_00935Not AvailablePositive177430 - 17821530264.6
hypothetical proteinDW736_00940Not AvailablePositive178299 - 1785629988.91
alpha-amylaseDW736_00945Not AvailableNegative178520 - 17994455763.1
atp-binding proteinDW736_00950Not AvailablePositive180036 - 18133450611.5
diguanylate cyclaseDW736_00955Not AvailablePositive181337 - 18184619117.2
bax inhibitor (bi)-1/ycca family proteinDW736_00960Not AvailablePositive181851 - 18254325926.6
mate family efflux transporterDW736_00965Not AvailablePositive182614 - 18397849999.2

Displaying genes 311 – 320 of 3490 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.