Coprobacillus sp. AF16-47

Kingdom

Bacillati

Phylum

Bacillota

Class

Erysipelotrichia

Order

Erysipelotrichales

Family

Coprobacillaceae

Genus

Coprobacillus

Description

Coprobacillus sp. AF16-47 is characterized by a single replicon, indicating a straightforward genomic organization that may contribute to its metabolic and ecological adaptability. The genome of this strain is accessible through the accession number QTXE00000000.1, which serves as a reference for further studies and comparisons within the genus Coprobacillus. As a member of the Coprobacillus genus, it is likely that Coprobacillus sp. AF16-47 plays a role in the gut microbiota, potentially contributing to digestion, fermentation processes, or the maintenance of gut health. This genus is known for its presence in various environments, including the intestines of mammals, where it may participate in the breakdown of complex carbohydrates and the production of short-chain fatty acids, which are important for gut health. The fact that Coprobacillus sp. AF16-47 has only one replicon suggests a streamlined genetic structure, which may facilitate rapid adaptation to its ecological niche, particularly in the complex microbial communities found in the gastrointestinal tract. This adaptation could be crucial for its survival and functionality within the gut ecosystem, where competition for resources and interactions with other microbial species are prevalent. In summary, Coprobacillus sp. AF16-47, with its single replicon and documented genomic data, exemplifies the diversity and specialization of gut-associated microorganisms, contributing to our understanding of microbial ecology and potential applications in health and nutrition.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassErysipelotrichia
OrderErysipelotrichales
FamilyCoprobacillaceae
GenusCoprobacillus
SpeciesCoprobacillus sp. AF16-47
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacillus sp. AF16-47 AF16-47.Scaf60, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorDWW67_00920Not AvailablePositive194749 - 19691182107.1
response regulatorDWW67_00925Not AvailablePositive196920 - 19841957340.2
nimc/nima family proteinDWW67_00930Not AvailablePositive198646 - 19903814935.7
hsp20/alpha crystallin family proteinDWW67_00940Not AvailablePositive199953 - 20039317071.1
gtp pyrophosphokinase family proteinDWW67_00950Not AvailableNegative201610 - 20227826632.1
hypothetical proteinDWW67_00955Not AvailablePositive202354 - 20271613950.1
atp-dependent clp protease atp-binding subunitDWW67_00960Not AvailablePositive202768 - 20470274998.1
glycoside hydrolase family 1 proteinDWW67_00965Not AvailablePositive204844 - 20624454672.6
murr/rpir family transcriptional regulatorDWW67_00970Not AvailablePositive206361 - 20721833117.8
had family phosphataseDWW67_00975Not AvailablePositive207340 - 20814630140.8

Displaying genes 311 – 320 of 3053 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.