Ruminococcus sp. AM42-11

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM42-11 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which may contribute to its motility. It has a single replicon, indicating a relatively simple genomic structure, which could have implications for its genetic stability and adaptability. The accession number for Ruminococcus sp. AM42-11 is QUIO00000000.1, providing a reference for researchers interested in studying its genetic and functional characteristics. The presence of flagella suggests that Ruminococcus sp. AM42-11 may have the ability to navigate its environment, which could be important for its ecological role in various habitats. In terms of ecological insight, Ruminococcus species are often associated with the gut microbiota of herbivorous animals, where they play a crucial role in the fermentation of complex carbohydrates. The motility conferred by flagella may enhance their ability to colonize specific niches within the gut, facilitating their contribution to the breakdown of fibrous plant material. This characteristic is vital for the overall health of the host and the efficient processing of dietary components, underscoring the importance of Ruminococcus sp. AM42-11 in microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM42-11
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM42-11
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM42-11 AM42-11.Scaf106, whole genome shotgun

Gene Summary

Adenine Count

1339627 bp

Thymine Count

1363311 bp

Guanine Count

984251 bp

Cytosine Count

1011672 bp

Genome Length

4698861 bp

Protein-coding Genes

3883 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate--ammonia ligaseDW904_04020Not AvailableNegative890536 - 89154338456.2
hypothetical proteinDW904_04025Not AvailablePositive891668 - 89269036443.2
carbamate kinaseDW904_04030Not AvailableNegative892851 - 89378333199.8
hypothetical proteinDW904_04035Not AvailablePositive894475 - 89493316703.4
duf11 domain-containing proteinDW904_04040Not AvailablePositive894996 - 89614741311.9
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDW904_04045Not AvailablePositive896387 - 89784453790.0
primosomal protein n'DW904_04050Not AvailablePositive897848 - 90007683987.2
peptide deformylaseDW904_04055Not AvailablePositive900170 - 90065217765.4
methionyl-trna formyltransferaseDW904_04060Not AvailablePositive900653 - 90160934846.4
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbDW904_04070Not AvailablePositive902319 - 90366851175.7

Displaying genes 801 – 810 of 4014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.