Ruminococcus sp. AM42-11

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM42-11 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which may contribute to its motility. It has a single replicon, indicating a relatively simple genomic structure, which could have implications for its genetic stability and adaptability. The accession number for Ruminococcus sp. AM42-11 is QUIO00000000.1, providing a reference for researchers interested in studying its genetic and functional characteristics. The presence of flagella suggests that Ruminococcus sp. AM42-11 may have the ability to navigate its environment, which could be important for its ecological role in various habitats. In terms of ecological insight, Ruminococcus species are often associated with the gut microbiota of herbivorous animals, where they play a crucial role in the fermentation of complex carbohydrates. The motility conferred by flagella may enhance their ability to colonize specific niches within the gut, facilitating their contribution to the breakdown of fibrous plant material. This characteristic is vital for the overall health of the host and the efficient processing of dietary components, underscoring the importance of Ruminococcus sp. AM42-11 in microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM42-11
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM42-11
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM42-11 AM42-11.Scaf106, whole genome shotgun

Gene Summary

Adenine Count

1339627 bp

Thymine Count

1363311 bp

Guanine Count

984251 bp

Cytosine Count

1011672 bp

Genome Length

4698861 bp

Protein-coding Genes

3883 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyrroline-5-carboxylate reductaseDW904_16205Not AvailablePositive3422665 - 342345928299.7
dj-1/pfpi family proteinDW904_16210Not AvailablePositive3423550 - 342410119392.4
trigger factorDW904_16215Not AvailablePositive3424304 - 342561148541.6
atp-dependent clp endopeptidase proteolytic subunit clppDW904_16220Not AvailablePositive3425730 - 342631120850.0
atp-dependent clp protease atp-binding subunit clpxDW904_16225Not AvailablePositive3426640 - 342796248610.3
endopeptidase laDW904_16230Not AvailablePositive3427982 - 343029486102.5
yiha family ribosome biogenesis gtp-binding proteinDW904_16235Not AvailablePositive3430312 - 343092922753.7
energy-coupling factor transporter atpaseDW904_16240Not AvailablePositive3430948 - 343179331026.4
energy-coupling factor transporter atpaseDW904_16245Not AvailablePositive3431784 - 343267132608.1
energy-coupling factor transporter transmembrane protein ecftDW904_16250Not AvailablePositive3432668 - 343347129780.9

Displaying genes 2891 – 2900 of 4014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.