Ruminococcus sp. AM42-11

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM42-11 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which may contribute to its motility. It has a single replicon, indicating a relatively simple genomic structure, which could have implications for its genetic stability and adaptability. The accession number for Ruminococcus sp. AM42-11 is QUIO00000000.1, providing a reference for researchers interested in studying its genetic and functional characteristics. The presence of flagella suggests that Ruminococcus sp. AM42-11 may have the ability to navigate its environment, which could be important for its ecological role in various habitats. In terms of ecological insight, Ruminococcus species are often associated with the gut microbiota of herbivorous animals, where they play a crucial role in the fermentation of complex carbohydrates. The motility conferred by flagella may enhance their ability to colonize specific niches within the gut, facilitating their contribution to the breakdown of fibrous plant material. This characteristic is vital for the overall health of the host and the efficient processing of dietary components, underscoring the importance of Ruminococcus sp. AM42-11 in microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM42-11
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM42-11
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM42-11 AM42-11.Scaf106, whole genome shotgun

Gene Summary

Adenine Count

1339627 bp

Thymine Count

1363311 bp

Guanine Count

984251 bp

Cytosine Count

1011672 bp

Genome Length

4698861 bp

Protein-coding Genes

3883 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
low molecular weight phosphotyrosine protein phosphataseDW904_05950Not AvailablePositive1301638 - 130211417975.7
phosphoenolpyruvate carboxykinase (atp)DW904_05955Not AvailablePositive1302589 - 130419359310.2
hypothetical proteinDW904_05960Not AvailablePositive1304667 - 130565338109.1
atp-binding cassette domain-containing proteinDW904_05965Not AvailableNegative1305797 - 130659129007.5
abc transporter permeaseDW904_05970Not AvailableNegative1306584 - 130751032977.8
abc transporter substrate-binding proteinDW904_05980Not AvailableNegative1308065 - 130904233939.5
n-acetylmuramoyl-l-alanine amidaseDW904_05985Not AvailablePositive1309210 - 130997428624.1
ydcf family proteinDW904_05990Not AvailablePositive1310083 - 131066121919.4
hlyc/corc family transporterDW904_05995Not AvailableNegative1310785 - 131207148131.0
hypothetical proteinDW904_06000Not AvailableNegative1312521 - 13127428282.02

Displaying genes 1131 – 1140 of 4014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.