Ruminococcus sp. AM42-11

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM42-11 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which may contribute to its motility. It has a single replicon, indicating a relatively simple genomic structure, which could have implications for its genetic stability and adaptability. The accession number for Ruminococcus sp. AM42-11 is QUIO00000000.1, providing a reference for researchers interested in studying its genetic and functional characteristics. The presence of flagella suggests that Ruminococcus sp. AM42-11 may have the ability to navigate its environment, which could be important for its ecological role in various habitats. In terms of ecological insight, Ruminococcus species are often associated with the gut microbiota of herbivorous animals, where they play a crucial role in the fermentation of complex carbohydrates. The motility conferred by flagella may enhance their ability to colonize specific niches within the gut, facilitating their contribution to the breakdown of fibrous plant material. This characteristic is vital for the overall health of the host and the efficient processing of dietary components, underscoring the importance of Ruminococcus sp. AM42-11 in microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM42-11
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM42-11
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM42-11 AM42-11.Scaf106, whole genome shotgun

Gene Summary

Adenine Count

1339627 bp

Thymine Count

1363311 bp

Guanine Count

984251 bp

Cytosine Count

1011672 bp

Genome Length

4698861 bp

Protein-coding Genes

3883 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yihy/virulence factor brkb family proteinDW904_05645Not AvailableNegative1220843 - 122183837869.1
spoiid/lytb domain-containing proteinDW904_05650Not AvailableNegative1222094 - 122327543755.1
galactose mutarotaseDW904_05655Not AvailableNegative1223408 - 122446639158.3
threonine synthaseDW904_05665Not AvailableNegative1224740 - 122623054593.3
cell wall hydrolaseDW904_05670Not AvailableNegative1226448 - 122737733728.6
Trna-proNot AvailableNot AvailablePositive1229995 - 1230068Not Available
3-isopropylmalate dehydratase small subunitDW904_05685Not AvailableNegative1230414 - 123090217825.2
3-isopropylmalate dehydratase large subunitDW904_05690Not AvailableNegative1230918 - 123218645210.8
lysr family transcriptional regulatorDW904_05695Not AvailablePositive1232453 - 123332832921.0
ketol-acid reductoisomeraseDW904_05700Not AvailableNegative1233463 - 123448237406.8

Displaying genes 1081 – 1090 of 4014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.